• BioNetGen

  • Referenced in 63 articles [sw09072]
  • BioNetGen: software for rule-based modeling of signal transduction based on the interactions of molecular...
  • AGG

  • Referenced in 50 articles [sw04449]
  • Applications of AGG include graph and rule-based modeling of software, validation of system properties...
  • BIOCHAM

  • Referenced in 45 articles [sw09927]
  • mainly composed of : a rule-based language for modeling biochemical systems (compatible with SBML); several...
  • C50

  • Referenced in 14 articles [sw08030]
  • package C50: C5.0 Decision Trees and Rule-Based Models. C5.0 decision trees and rule-based...
  • VADER

  • Referenced in 6 articles [sw39061]
  • VADER: A Parsimonious Rule-Based Model for Sentiment Analysis of Social Media Text. The inherent ... analysis. We present VADER, a simple rule-based model for general sentiment analysis, and compare ... lexical features with consideration for five general rules that embody grammatical and syntactical conventions ... sentiment intensity. Interestingly, using our parsimonious rule-based model to assess the sentiment of tweets...
  • RuleBender

  • Referenced in 7 articles [sw34671]
  • RuleBender: A visual interface for rule-based modeling. Results: We introduce RuleBender, a novel visualization ... integrated visualization, modeling and simulation of rule-based intracellular biochemistry. We present the user requirements ... behind RuleBender, with emphasis on visual global/local model exploration and integrated execution of simulations...
  • lp2normal

  • Referenced in 7 articles [sw25505]
  • programming (ASP) features a rich rule-based modeling language for encoding search problems. While normal...
  • LBS

  • Referenced in 15 articles [sw12372]
  • Biochemical Systems (LBS) which combines rule-based approaches to modelling with modularity. It is based...
  • ROTOR

  • Referenced in 6 articles [sw11955]
  • central Europe. The resulting static rule-based model, called ROTOR, consists of two basic steps ... specific field operations using a relational data base. The database includes all relevant crops recorded ... weed control. The former allows for the modelling of all possible positions of a crop ... crops. The CPAs are evaluated using rule-based assessment modules for yield, economic performance...
  • Rules2CP

  • Referenced in 5 articles [sw06255]
  • Rules2CP is a general purpose rule-based modeling language for constraint programming. It aims...
  • PMaude

  • Referenced in 31 articles [sw08422]
  • specification language for modelling probabilistic concurrent and distributed systems. The language, based on PMaude ... characteristics of a high-level rule-based programming language. Furthermore, we provide tool support ... performing discrete-event simulations of models written in PMaude, and for statistically analyzing various quantitative...
  • PyBioNetFit

  • Referenced in 3 articles [sw34668]
  • biological models specified using the BioNetGen rule-based modeling language (BNGL) or the Systems Biology...
  • KaSim

  • Referenced in 2 articles [sw29287]
  • KaSim is a stochastic simulator of rule-based models [13, 12, 14] written in KAPPA ... Gillespie’s algorithm [21, 22] to rule-based models. A simulation event corresponds...
  • OntoWebber

  • Referenced in 6 articles [sw01783]
  • underlying data. Based on a domain ontology and a site modeling ontology, site views ... browsable Web site. Rule-based manipulation of site models provides a declarative way to personalize...
  • KappaTools

  • Referenced in 2 articles [sw34678]
  • KaSim is a stochastic simulator for rule-based models written in Kappa. KaSa...
  • kTAM

  • Referenced in 1 article [sw22257]
  • kinetic tile assembly model using a rule-based approach. The (abstract) Tile Assembly Model (aTAM ... paper we introduce an agent- and rule-based modelling approach for kTAM, and its implementation ... such type of modelling. We show not only how the modelling of kTAM ... implemented in NFsim as stand-alone rule-based models...
  • TRuML

  • Referenced in 2 articles [sw34202]
  • TRuML is a Translator for Rule-based Modeling Languages. TRuML is designed to convert between...
  • imodels

  • Referenced in 2 articles [sw38412]
  • These models can often replace black-box models while improving interpretability and computational e ciency ... framework for developing custom tools and rule-based models for interpretability...
  • NLProlog

  • Referenced in 2 articles [sw41560]
  • Question Answering in Natural Language. Rule-based models are attractive for various tasks because they ... linguistic variability. In contrast, neural models can cope very well with ambiguity by learning distributed ... models that are difficult to interpret. In this paper, we describe a model combining neural ... system that can apply rule-based reasoning to natural language, and induce domain-specific rules...
  • YAGO

  • Referenced in 54 articles [sw11909]
  • rule-based and heuristic methods described in this paper. The resulting knowledge base ... about 95%. YAGO is based on a logically clean model, which is decidable, extensible...