• RSEM

  • Referenced in 12 articles [sw17160]
  • revolutionizing the way transcript abundances are measured. A key challenge in transcript quantification from ... experiments, in terms of the number of reads, read length, and whether reads come from ... software package for quantifying gene and isoform abundances from single-end or paired ... accurate gene-level abundance estimates are best obtained with large numbers of short single...
  • JChemPaint

  • Referenced in 2 articles [sw26087]
  • drawing chemical structures are abundant and a number of formerly commercial programs in this area...
  • iNEXT

  • Referenced in 2 articles [sw22213]
  • extrapolation of species diversity (Hill numbers) for individual-based (abundance) data or sampling-unit- based...
  • breakaway

  • Referenced in 1 article [sw41429]
  • rare species and a small number of highly abundant species. The class of models implemented...
  • hurdlr

  • Referenced in 1 article [sw41970]
  • that count data have an abundance of large-number observations which would be considered outliers...
  • FD

  • Referenced in 3 articles [sw04572]
  • number and type of functional traits, and can also consider species relative abundances. It also...
  • ws2m

  • Referenced in 2 articles [sw24870]
  • number of species so far obtained in the collection. It can report species-abundance distributions...
  • AlterBBN

  • Referenced in 3 articles [sw16357]
  • abundances of the elements. In particular the baryon-to-photon ratio and the effective number...
  • KmerStream

  • Referenced in 2 articles [sw36880]
  • abundance estimation. Results: We present KmerStream, a streaming algorithm for estimating the number of distinct...
  • Reptile

  • Referenced in 2 articles [sw35195]
  • more abundant, and errors more frequent than in traditional Sanger sequencing. Processing massive numbers...
  • Varun

  • Referenced in 4 articles [sw13191]
  • model on one hand and the abundance of candidates on the other hand. In particular ... cares” escalate exponentially with their number, and this gets only worse...
  • DivNet

  • Referenced in 1 article [sw32943]
  • estimates, obtained by taking the observed relative abundances of each taxon and plugging them into ... number of reasons, including that there may be unobserved taxa, and the observed relative abundances...
  • MetaVelvet

  • Referenced in 1 article [sw17337]
  • abundant species are likely misidentified as repeats in a single genome, resulting in a number ... made use of two features, the coverage (abundance) difference and graph connectivity, for the decomposition ... MetaVelvet produced longer scaffolds and increased the number of predicted genes...
  • Salmon

  • Referenced in 7 articles [sw31865]
  • achieves its accuracy and speed via a number of different innovations, including ... inference algorithm to estimate transcript-level abundances for your experiment...
  • CloudGenius

  • Referenced in 4 articles [sw20154]
  • cloud service providers, and the increasing number of compute services offered, a migration of information ... virtual machine (VM ) images from an abundance of possibilities. Therefore, a migration process...
  • FastPM

  • Referenced in 4 articles [sw41435]
  • when compared to COLA with the same number of steps and force resolution. While increasing ... find that for abundance matched halos the stochasticity remains low even for Ns=5. FastPM ... useful are generating a large number of mocks, producing non-linear statistics where one varies...
  • miRcode

  • Referenced in 1 article [sw34970]
  • abundant regulators of cell physiology, and their functions may be diverse. A small number...
  • NR-2L

  • Referenced in 9 articles [sw26879]
  • receptors (NRs) are one of the most abundant classes of transcriptional regulators in animals. They ... less than 2 minutes. The less the number of query proteins is, the shorter...
  • Fizzy

  • Referenced in 2 articles [sw38620]
  • fizzy will run feature selection on taxonomic abundances obtained from the biom file given ... selection tool that provides inference on the number of features that are deemed as important...
  • GERBIL

  • Referenced in 4 articles [sw17194]
  • resolution and block identification using likelihood. The abundance of genotype data generated by individual ... which haplotypes are generated from a small number of core haplotypes, allowing for mutations, rare...