• PReMiuM

  • Referenced in 13 articles [sw14746]
  • also included. Additionally, predictions may be made for the response, and missing values ... functions for post-processing of the output are also provided. In addition to fitting mixtures...
  • rsvd

  • Referenced in 7 articles [sw16104]
  • value decomposition to compute the most significant principal components. This package also includes a function ... randomized) robust principal component analysis (RPCA). In addition several plot functions are provided...
  • NLPL1

  • Referenced in 1 article [sw25050]
  • absolute function values. In addition there may be any set of equality or inequality constraints ... assumed that all individual problem functions are continuously differentiable. Numerical Method: The problem is transformed...
  • frailtypack

  • Referenced in 43 articles [sw06070]
  • penalized likelihood estimation on the hazard function but also a parametric estimation. 1) A shared ... using an approximated cross-validation procedure. 2) Additive frailty models for proportional hazard models with ... event for clustered data or not. Prediction values are available. Left truncated (not for Joint...
  • runjags

  • Referenced in 18 articles [sw10688]
  • runjags: Interface utilities, parallel computing methods and additional distributions for MCMC models in JAGS. This ... Just Another Gibbs Sampler (JAGS). The primary functions facilitate running parallel JAGS models for multiple ... model files with data and initial values lists. Model fitting can be done locally ... other user specified functions. A JAGS extension module implementing additional distributions for JAGS models (including...
  • corpor

  • Referenced in 22 articles [sw09381]
  • definite and well-conditioned covariance matrix. In addition to inferring the covariance matrix the package ... shrinkage correlation matrix. Furthermore, functions are available for fast singular value decomposition, for computing...
  • BioBayes

  • Referenced in 26 articles [sw08082]
  • degree of uncertainty about the values of kinetic parameters, about the general structure ... differential equations. The package is extensible allowing additional modules to be included by developers. There ... other such packages available which provide this functionality...
  • UCODE

  • Referenced in 5 articles [sw25638]
  • defined flexibly with user-specified functions. Observations to be matched in the regression ... equivalent value can be produced, thus simulated equivalent values are calculated using values that appear ... manipulated with additive and multiplicative functions, if necessary. Prior, or direct, information on estimated parameters ... weighted least-squares objective function with respect to the parameter values using a modified Gauss...
  • weightedHypervolume

  • Referenced in 32 articles [sw31878]
  • hypervolume indicators for different weight distribution functions. Using the hypervolume of the dominated portion ... measure yields a strictly better quality value for the former than for the latter ... that achieves the maximally possible quality value for a particular problem contains all Pareto-optimal ... extremes of the second objective plus one additional extreme point for the first objective, Focus...
  • deTestSet

  • Referenced in 22 articles [sw06062]
  • equations. In addition it includes 6 new codes to solve initial value problems ... derived from the test set for initial value problem solvers available at url{http://www.dm.uniba.it ... common interface to the defining problem functions. Many of these facilities are now available...
  • GeNIe

  • Referenced in 7 articles [sw13964]
  • functions, Noisy-OR and Noisy-AND gates, value of information, and sensitivity analysis. In addition...
  • EMMIXcskew

  • Referenced in 6 articles [sw16159]
  • functions to fit the FM-CFUST model, including procedures for generating different initial values. Additional...
  • PICL

  • Referenced in 15 articles [sw11667]
  • Correct execution is also a function of the parameter values passed to the routines ... inform the user when a parameter value is not legal on a particular machine. Programs ... simple user-defined events if a few additional statements are added to the source code...
  • CCA

  • Referenced in 16 articles [sw09506]
  • same experimental units. The cancor() function in R (R Development Core Team 2007) performs ... required to provide the user with additional tools to facilitate the interpretation of the results ... enable the user to handle missing values. The CCA package also includes a regularized version...
  • corpcor

  • Referenced in 14 articles [sw10199]
  • definite and well-conditioned covariance matrix. In addition to inferring the covariance matrix the package ... shrinkage correlation matrix. Furthermore, functions are available for fast singular value decomposition, for computing...
  • PROFEAT

  • Referenced in 14 articles [sw16924]
  • predicting proteins and peptides of different structural, functional and interaction profiles. PROFEAT (Protein Features ... that include 51 descriptors and 1447 descriptor values. The computed features include amino acid composition ... various structural and physicochemical properties. In addition, it can also compute previous autocorrelations descriptors based ... published works for predicting proteins of functional classes, protein–protein interactions and MHC-binding peptides...
  • CVODES

  • Referenced in 35 articles [sw04946]
  • stiff and nonstiff ODE systems (initial value problem) given in explicit form ... model parameters and the number of functional outputs, one of two sensitivity methods is more ... each parameter in turn to yield an additional system of the same size...
  • rksuite_90

  • Referenced in 6 articles [sw00809]
  • present Fortran 90 software for the initial value problem in ordinary differential equations, including ... structures of variables and to provide additional functionality. A novel feature of this software...
  • BranchCuts

  • Referenced in 5 articles [sw24938]
  • Typical examples include the addition formulae for inverse trigonometric functions. Understanding these cuts is essential ... working with the single-valued counterparts, the common approach to encoding multi-valued functions...
  • miceadds

  • Referenced in 2 articles [sw15857]
  • addition to some utility functions, main features include plausible value imputation, multilevel imputation functions, imputation...