• iSNO-PseAAC

  • Referenced in 39 articles [sw22446]
  • specific amino acid propensity into pseudo amino acid composition. Posttranslational modifications (PTMs) of proteins ... proteins by incorporating the position-specific amino acid propensity (PSAAP ... into the general form of pseudo amino acid composition (PseAAC). The predictor was implemented using...
  • PseAAC

  • Referenced in 31 articles [sw16469]
  • generating various kinds of protein pseudo amino acid composition. The pseudo amino acid (PseAA) composition...
  • PseAAC-Builder

  • Referenced in 25 articles [sw22404]
  • generating various special Chou’s pseudo-amino acid compositions. The pseudo-amino acid composition ... various modes of Chou’s pseudo-amino acid composition in a much more efficient...
  • propy

  • Referenced in 27 articles [sw22402]
  • features, including amino acid composition, dipeptide composition, tripeptide composition, normalized Moreau-Broto autocorrelation, Moran autocorrelation ... order-coupling number, quasi-sequence-order descriptors, composition, transition and distribution of various structural ... properties and two types of pseudo amino acid composition (PseAAC) descriptors. These features could...
  • ESLpred

  • Referenced in 20 articles [sw22403]
  • prediction methods are based on either amino acid composition or N-terminal characteristics ... acid composition, dipeptide composition and physico-chemical properties. The SVM module based on dipeptide composition ... than the SVM modules based on amino acid composition or physico-chemical properties. In addition ... dipeptide compositions, 33 properties, 20 amino acid compositions of the protein and 5 from...
  • GPCR-CA

  • Referenced in 35 articles [sw25949]
  • samples of proteins through their pseudo amino acid composition (Chou, K.C. Proteins...
  • pSuc-Lys

  • Referenced in 31 articles [sw16643]
  • coupled information into the general pseudo amino acid composition, (2) balancing out skewed training dataset...
  • GPCR-2L

  • Referenced in 22 articles [sw22409]
  • hybridizing two different modes of pseudo amino acid compositions. G protein-coupled receptors (GPCRs ... hybridizing two different modes of pseudo-amino acid composition (PseAAC): the functional domain PseAAC ... query protein sequence of 500 amino acids. The longer the sequence is, the more time...
  • iNitro-Tyr

  • Referenced in 22 articles [sw22450]
  • sites in proteins with general pseudo amino acid composition. Nitrotyrosine is one of the post ... dipeptide propensity into the general pseudo amino acid composition for discriminating the nitrotyrosine sites from...
  • pLoc-mEuk

  • Referenced in 30 articles [sw24440]
  • information into the general PseAAC (Pseudo Amino Acid Composition). Rigorous cross-validations on a high...
  • iMethyl-PseAAC

  • Referenced in 21 articles [sw22443]
  • Protein Methylation Sites via a Pseudo Amino Acid Composition Approach. Before becoming the native proteins ... into the general form of pseudo amino acid composition. It was observed by the rigorous...
  • iPPI-Esml

  • Referenced in 26 articles [sw22413]
  • general form of PseAAC (pseudo amino acid composition): (1) the physicochemical properties derived from...
  • pLoc-mPlant

  • Referenced in 27 articles [sw25191]
  • Chou’s general PseAAC (Pseudo Amino Acid Composition). Rigorous cross-validation on the same stringent...
  • Plant-mPLoc

  • Referenced in 27 articles [sw22435]
  • through three different modes of pseudo amino acid composition. It can be used to identify...
  • iHyd-PseAAC

  • Referenced in 16 articles [sw27675]
  • Dipeptide Position-Specific Propensity into Pseudo Amino Acid Composition. Post-translational modifications (PTMs) play crucial ... iHyd-PseAAC” (identify hydroxylation by pseudo amino acid composition) was proposed by incorporating the dipeptide ... into the general form of pseudo amino acid composition. It was demonstrated by rigorous cross...
  • Hum-PLoc

  • Referenced in 24 articles [sw26863]
  • ontology (GO) database and amphiphilic pseudo amino acid composition (PseAA). Based on such a representation ... buried into a pile of complicated amino acid sequences although with a different manner...
  • Euk-PLoc

  • Referenced in 24 articles [sw22420]
  • gene ontology database and amphiphilic pseudo amino acid composition. Based on such a representation...
  • PseAAC-General

  • Referenced in 16 articles [sw22430]
  • general form of Chou’s pseudo-amino acid composition for large-scale protein datasets ... general form pseudo-amino acid composition (PseAAC) has been widely used to represent protein sequences ... mode, 544 physicochemical properties of the amino acids are available for choosing. The computing efficiency...
  • iSuc-PseOpt

  • Referenced in 23 articles [sw22429]
  • coupling effects into the general pseudo amino acid composition and using KNNC (K-nearest neighbors...
  • pLoc-mVirus

  • Referenced in 23 articles [sw24439]
  • information into the general PseAAC (Pseudo Amino Acid Composition). Rigorous cross-validation on a same...