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  • Mathematica
  • Referenced in 6041 articles [sw00554]
  • Almost any workflow involves computing results, and that...

  • Matlab
  • Referenced in 12477 articles [sw00558]
  • MATLAB® is a high-level language and interactive...

  • R
  • Referenced in 8728 articles [sw00771]
  • R is a language and environment for statistical...

  • NEURON
  • Referenced in 179 articles [sw03059]
  • Parallel network simulations with NEURON. The NEURON simulation...

  • PETSc
  • Referenced in 1212 articles [sw04012]
  • The Portable, Extensible Toolkit for Scientific Computation (PETSc...

  • Qhull
  • Referenced in 302 articles [sw04419]
  • The convex hull of a point set P...

  • Rfam
  • Referenced in 33 articles [sw04637]
  • The Rfam database is a collection of RNA...

  • Rnamotif
  • Referenced in 10 articles [sw04638]
  • The rnamotif program [1] searches a database for...

  • LIBSVM
  • Referenced in 1114 articles [sw04879]
  • LIBSVM is a library for Support Vector Machines...

  • WEKA
  • Referenced in 293 articles [sw06435]
  • WEKA: Waikato Environment for Knowledge Analysis. WEKA is...

  • Chemotaxis
  • Referenced in 174 articles [sw07009]
  • Chemotaxis: approximation of PDEs models (parabolic, hyperbolic and...

  • SOFA

  • Referenced in 14 articles [sw07014]
  • Sofa-an open source framework for medical simulation...

  • OEIS
  • Referenced in 3522 articles [sw07248]
  • The On-Line Encyclopedia of Integer Sequence. The...

  • Biopython
  • Referenced in 19 articles [sw07357]
  • Biopython: freely available Python tools for computational molecular...

  • fminsearch
  • Referenced in 262 articles [sw07467]
  • Convergence properties of the Nelder--Mead simplex method...

  • minet
  • Referenced in 7 articles [sw08432]
  • minet: A R/Bioconductor Package for Inferring Large Transcriptional...

  • Spikenet
  • Referenced in 12 articles [sw08892]
  • SpikeNET: an event-driven simulation package for modelling...

  • Sylamer
  • Referenced in 2 articles [sw11231]
  • Sylamer is a system for finding significantly over...

  • COPASI
  • Referenced in 65 articles [sw12253]
  • COPASI: biochemical network simulator. COPASI is a software...

  • SimpleMKL
  • Referenced in 62 articles [sw12290]
  • SimpleMKL. Multiple kernel learning (MKL) aims at simultaneously...