• MODENA

  • Referenced in 5 articles [sw23804]
  • multi-objective RNA inverse folding. Artificially synthesized RNA molecules have recently come under study since ... variety of novel functional molecules. When designing artificial RNA sequences, secondary structure should be taken...
  • RNASTAR

  • Referenced in 1 article [sw17132]
  • evolution of natural and artificial RNAs. Automated RNA alignment algorithms often fail to recapture ... These alignments included both naturally and artificially selected molecules. We used principles of isostericity ... insight into evolutionary principles governing change in RNA structural motifs. The improved alignments have been...
  • LAPACK

  • Referenced in 1702 articles [sw00503]
  • LAPACK is written in Fortran 90 and provides...
  • Maple

  • Referenced in 5373 articles [sw00545]
  • The result of over 30 years of cutting...
  • Matlab

  • Referenced in 13544 articles [sw00558]
  • MATLAB® is a high-level language and interactive...
  • R

  • Referenced in 9969 articles [sw00771]
  • R is a language and environment for statistical...
  • STAR

  • Referenced in 14 articles [sw02515]
  • STAR: ultrafast universal RNA-seq aligner. Motivation: Accurate...
  • FFTW

  • Referenced in 549 articles [sw04126]
  • FFTW is a C subroutine library for computing...
  • Bioconductor

  • Referenced in 319 articles [sw04205]
  • Bioconductor provides tools for the analysis and comprehension...
  • Rfam

  • Referenced in 33 articles [sw04637]
  • The Rfam database is a collection of RNA...
  • DLMF

  • Referenced in 2809 articles [sw04968]
  • NIST digital library of mathematical functions. The National...
  • GAUSSIAN

  • Referenced in 193 articles [sw06118]
  • Gaussian is an electronic structure program, used by...
  • MPI/MPICH

  • Referenced in 165 articles [sw06126]
  • MPI / MPICH Message Passing Interface MPI is the...
  • edgeR

  • Referenced in 53 articles [sw06936]
  • edgeR: a Bioconductor package for differential expression analysis...
  • OEIS

  • Referenced in 4221 articles [sw07248]
  • The On-Line Encyclopedia of Integer Sequence. The...
  • RNAshapes

  • Referenced in 7 articles [sw07960]
  • RNAshapes: an integrated RNA analysis package based on...
  • onechannelgui

  • Referenced in 3 articles [sw07962]
  • oneChannelGUI: A graphical interface designed to facilitate analysis...
  • Scikit

  • Referenced in 611 articles [sw08058]
  • Scikit-learn: machine learning in python. Scikit-learn...
  • Lua

  • Referenced in 40 articles [sw10207]
  • Lua is a powerful, fast, lightweight, embeddable scripting...