
PROMALS
 Referenced in 5 articles
[sw22476]
 output includes a colored alignment augmented with information about sequence grouping, predicted secondary structures...

elrint3d
 Referenced in 1 article
[sw13934]
 Dimensional Nonadaptive Automatic Cubature Routine Using a Sequence of Embedded Lattice Rules. A threedimensional ... based on a 2scopy lattice augmentation sequence, the seed lattice for which has been...

StepBrothers
 Referenced in 1 article
[sw34333]
 model decomposes recombinant sequences into their ancestral portions and then augments each portion onto ... unique partially observed sequences. This data augmentation generates a random number of sequences related...

BIONJ
 Referenced in 30 articles
[sw08301]
 when these estimates are obtained from aligned sequences. At each step it permits the selection ... finding the correct tree may be augmented by as much as 15%. (http://mbe.oxfordjournals.org/content/14/7/685.short)...

QPALM
 Referenced in 6 articles
[sw35397]
 proximal augmented Lagrangian method. This method solves a sequence of inner subproblems which...

QSDPNAL
 Referenced in 33 articles
[sw18799]
 QSDPNALPhase II, we design an augmented Lagrangian method (ALM) wherein the inner subproblem ... original linear systems and novel shadow sequences are constructed to alleviate the numerical difficulties brought...

Holophrasm
 Referenced in 2 articles
[sw30124]
 using a neuralnetworkaugmented bandit algorithm and a sequencetosequence model for action...

Conformer
 Referenced in 4 articles
[sw35794]
 Conformer: Convolutionaugmented Transformer for Speech Recognition. Recently Transformer and Convolution neural network (CNN) based ... sequence in a parameterefficient way. To this regard, we propose the convolutionaugmented transformer...

DeepAPI
 Referenced in 1 article
[sw15213]
 generates an API sequence based on the context vector. We also augment the RNN Encoder ... that our approach generates largely accurate API sequences and outperforms the related approaches...

NCL
 Referenced in 1 article
[sw36527]
 LANCELOT augmented Lagrangian method, reformulated as a short sequence of nonlinearly constrained subproblems that...

FPC
 Referenced in 2 articles
[sw20468]
 basic fixedpoint iterations should be augmented with a continuation approach. In brief, the continuation ... consists of solving (1) for an increasing sequence of μ values, using the solution...

ESLpred2
 Referenced in 2 articles
[sw35344]
 eukaryotic proteins. Results: Here, we describe augmentation in the prediction performance obtained for our most ... redundant dataset encompassing three kingdoms specific protein sequence sets; 1198 fungi sequences, 2597 from animal...

DEGEN
 Referenced in 1 article
[sw07626]
 that are suitable for convergence of the augmented Lagrangian methods, such as the recently proposed ... stationarity is guaranteed if the generated dual sequence is bounded, which we show ... itself is unbounded. Experiments with the ALGENCAN augmented Lagrangian solver on the MacMPEC and DEGEN...

HAMAP
 Referenced in 1 article
[sw22977]
 UniProt, providing annotation for millions of unreviewed sequences of UniProtKB/TrEMBL. Here we report ... Database Issue of 2013. We continue to augment HAMAP with new family profiles and annotation ... which simplify the classification and annotation of sequences, and the incorporation of an improved sequence...

ktrain
 Referenced in 2 articles
[sw33372]
 ktrain: A LowCode Library for Augmented Machine Learning. We present ktrain, a lowcode ... that support text data (e.g., text classification, sequence tagging, opendomain questionanswering), vision data...

HybridNET
 Referenced in 3 articles
[sw14682]
 genes. When looking at another segment of sequences, a different phylogenetic tree can be obtained ... maximum (acyclic) agreement forests. We then augment the program so that it can construct...

MPDopt
 Referenced in 1 article
[sw23094]
 both offline and online optimization of control sequences for dynamic systems governed by differentiable nonlinear ... introducing control trajectory smoothing via state augmentation. Finally, we present a new Matlab toolbox...

asremlPlus
 Referenced in 1 article
[sw15468]
 package asremlPlus: Augments the Use of ’Asreml’ in Fitting Mixed Models. Assists in automating ... history of the fitting of a sequence of models is kept in a data frame...

NFBLab
 Referenced in 1 article
[sw39676]
 approach to treat neurological conditions and augment brain functions. Although the early NFB studies date ... describes signal processing tracts, experimental blocks and sequences including randomization of experimental blocks. NFBLab implements...

BoomerAMG
 Referenced in 196 articles
[sw00086]
 BoomerAMG: A parallel algebraic multigrid solver and preconditioner...