• BetaSCP

  • Referenced in 3 articles [sw08772]
  • optimization by side-chain positioning via beta-complex. A molecular structure determines a molecular function ... chain positioning problem based on the beta-complex which is a derivative geometric construct...
  • BetaConcept

  • Referenced in 2 articles [sw28090]
  • Program for Voronoi Diagrams, Dual Structures, and Complexes in the Plane. Voronoi diagrams are powerful ... science problems in an unified framework. Beta-complex is a generalization of (weighted) alpha-complex ... diagram, its dual structure, and the beta-complex in the plane. Beta Concept...
  • BULL!

  • Referenced in 2 articles [sw25439]
  • Voronoi diagram, quasi-triangulation, and beta-complex. Libraries are available for the power diagram ... present the BULL! library which abbreviates “beta universe library liberandam!” for computing the Voronoi diagram ... quasi-triangulation, and extracting the beta-complex. Being an engine library implemented in the standard...
  • BetaVoid

  • Referenced in 1 article [sw23975]
  • BetaVoid: molecular voids via beta-complexes and Voronoi diagrams. Molecular external structure is important ... Voronoi diagram of atoms and the beta-complex. The correctness and efficiency of the proposed...
  • BetaMol

  • Referenced in 0 articles [sw40506]
  • Visualization Software Based on the Beta-Complex Derived from the Voronoi Diagram. Molecular shape ... physicochemical properties. Due to the complexity of the problems in biomolecular structure, in-silico approach ... recent theory of the beta-complex which is derived from the Voronoi diagram of spheres ... rigorous and computationally efficient theory of beta-complex. BetaMol is implemented in the standard...
  • CGAL

  • Referenced in 402 articles [sw00118]
  • The goal of the CGAL Open Source Project...
  • LEDA

  • Referenced in 264 articles [sw00509]
  • In the core computer science areas -- data structures...
  • CPLEX

  • Referenced in 2804 articles [sw04082]
  • IBM® ILOG® CPLEX® offers C, C++, Java, .NET...
  • Miniball

  • Referenced in 44 articles [sw05179]
  • The smallest enclosing ball of balls: combinatorial structure...
  • VRONI

  • Referenced in 27 articles [sw05936]
  • VRONI: Voronoi Diagrams of Points, Segments and Circular...
  • CHARMM

  • Referenced in 120 articles [sw05953]
  • CHARMM (Chemistry at HARvard Macromolecular Mechanics). CHARMM models...
  • AutoDock

  • Referenced in 34 articles [sw09659]
  • AutoDock is a suite of automated docking tools...
  • BetaSCP2

  • Referenced in 1 article [sw09840]
  • BetaSCP2: a program for the optimal prediction of...
  • CAVER

  • Referenced in 1 article [sw20702]
  • CAVER: algorithms for analyzing dynamics of tunnels in...
  • BetaSCPWeb

  • Referenced in 1 article [sw20703]
  • BetaSCPWeb: Side-chain prediction for protein structures using...
  • SCWRL4

  • Referenced in 7 articles [sw22393]
  • Improved prediction of protein side-chain conformations with...
  • RASP

  • Referenced in 2 articles [sw24067]
  • RASP: rapid modeling of protein side chain conformations...
  • QTFier

  • Referenced in 12 articles [sw40507]
  • QTFier creates a text file containing the quasi...