
Normaliz
 Referenced in 152 articles
[sw00630]
 Diophantine equations, inequalities and congruences or a binomial ideal. Normaliz computes the dual cone...

PROC NLMIXED
 Referenced in 65 articles
[sw11039]
 most common being pharmacokinetics and overdispersed binomial data. PROC NLMIXED enables you to specify ... effects) having either a standard form (normal, binomial, Poisson) or a general distribution that...

DEseq
 Referenced in 51 articles
[sw10344]
 gene expression analysis based on the negative binomial distribution. Estimate variancemean dependence in count ... based on a model using the negative binomial distribution...

covTest
 Referenced in 70 articles
[sw19129]
 LARS (lasso) for linear models, elastic net, binomial and Cox survival model...

BayesLogit
 Referenced in 44 articles
[sw09312]
 fully Bayesian inference in models with binomial likelihoods. The approach appeals to a new class ... method, including logistic regression, negative binomial regression, nonlinear mixedeffect models, and spatial models...

Binomials.m2
 Referenced in 34 articles
[sw06695]
 compute primary and other decompositions of binomial ideals. The current implementation is for pure difference ... package was first described in Decomposing Binomial Ideals (AISM...

HYP
 Referenced in 27 articles
[sw04307]
 HYPQ. Mathematica packages for the manipulation of binomial sums and hypergeometric series respectively $q$binomial ... HYPQ. HYP allows a convenient handling of binomial sums and hypergeometric series, while ... HYPQ, allows a convenient handling of qbinomial sums and basic hypergeometric series...

COUNT
 Referenced in 47 articles
[sw26562]
 code for Hilbe, J.M. 2011. Negative Binomial Regression, 2nd Edition (Cambridge University Press) and Hilbe...

metafor
 Referenced in 31 articles
[sw12291]
 Abbe, Baujat plots). For metaanalyses of binomial and persontime data, the package also...

ump
 Referenced in 27 articles
[sw12360]
 values. The optimal hypothesis tests for the binomial distribution and some other discrete distributions...

brms
 Referenced in 21 articles
[sw19099]
 among others – linear, robust linear, binomial, Poisson, survival, response times, ordinal, zeroinflated, hurdle...

gamsel
 Referenced in 19 articles
[sw19132]
 overall penalty lambda, both for gaussian and binomial families...

BaySeq
 Referenced in 17 articles
[sw10343]
 sequencing samples. The method assumes a negative binomial distribution for the data and derives...

iRSpotPse6NC
 Referenced in 13 articles
[sw27677]
 Pseudo Ktuple Nucleotide Composition) via the binomial distribution approach. It has been observed...

binom
 Referenced in 8 articles
[sw04522]
 package binom: Binomial Confidence Intervals For Several Parameterizations , Constructs confidence intervals on the probability ... success in a binomial experiment via several parameterizations...

DCDFLIB
 Referenced in 8 articles
[sw04606]
 distribution functions, inverses, and parameters for: beta, binomial, chisquare, noncentral chisquare, F, noncentral ... gamma, negative binomial, normal, Poisson, Student...

weightedScores
 Referenced in 8 articles
[sw12457]
 binary (logistic and probit), Poisson and negative binomial regression, with dependent data. Two versions ... negative binomial regression from Cameron and Trivedi (1998) are used...

SPatt
 Referenced in 10 articles
[sw10519]
 range of techniques (exact, Gaussian, large deviations, binomial and compound Poisson). The SPatt package (Statistics...

PReMiuM
 Referenced in 10 articles
[sw14746]
 through cluster membership. The package allows Bernoulli, Binomial, Poisson, Normal, survival and categorical response...

CARBayes
 Referenced in 10 articles
[sw15288]
 McMC) simulation. The response variable can be binomial, Gaussian or Poisson. Spatial autocorrelation is modelled...