• Corbi

  • Referenced in 2 articles [sw17707]
  • alignment, subnetwork extraction and search, network biomarker identification...
  • contamDE

  • Referenced in 1 article [sw31459]
  • primary approach of cancer-related biomarker identification. Due to the infiltration of tumor surrounding normal ... uniquely found several potential therapy and prognostic biomarkers of prostate cancer and non-small cell...
  • momr

  • Referenced in 0 articles [sw16008]
  • core package and contains routines for biomarker identification and exploration. Developed since the beginning...
  • QuPath

  • Referenced in 2 articles [sw37672]
  • comprehensive panel of tumor identification and high-throughput biomarker evaluation tools, QuPath provides researchers with...
  • MetaboAnalyst

  • Referenced in 3 articles [sw28993]
  • that are significantly different between two conditions (biomarker discovery); 2) to use the metabolomic data ... addition, MetaboAnalyst also provide tools for compound identification and pathway mapping for annotating significant features...
  • SubgrpID

  • Referenced in 1 article [sw40283]
  • package SubgrpID: Patient Subgroup Identification for Clinical Drug Development. Function Wrapper contains four algorithms ... developing threshold-based multivariate (prognostic/predictive) biomarker signatures via bootstrapping and aggregating of thresholds from trees...
  • Matlab

  • Referenced in 13702 articles [sw00558]
  • MATLAB® is a high-level language and interactive...
  • R

  • Referenced in 10196 articles [sw00771]
  • R is a language and environment for statistical...
  • SVMlight

  • Referenced in 268 articles [sw04076]
  • Description (homepage): SVMlight is an implementation of Vapnik...
  • Bioconductor

  • Referenced in 328 articles [sw04205]
  • Bioconductor provides tools for the analysis and comprehension...
  • SPSS

  • Referenced in 677 articles [sw04269]
  • SPSS is a computer program used for survey...
  • CODA

  • Referenced in 359 articles [sw04290]
  • R package coda: Output analysis and diagnostics for...
  • car

  • Referenced in 78 articles [sw04358]
  • R package car: Companion to Applied Regression , This...
  • mvtnorm

  • Referenced in 174 articles [sw04359]
  • R package mvtnorm: Multivariate Normal and t Distributions...
  • survival

  • Referenced in 201 articles [sw04364]
  • R package survival: Survival analysis, including penalised likelihood...
  • MASS (R)

  • Referenced in 355 articles [sw04479]
  • R package MASS: Support Functions and Datasets for...
  • fda (R)

  • Referenced in 1571 articles [sw04511]
  • fda: Functional Data Analysis , These functions were developed...
  • rms

  • Referenced in 100 articles [sw04532]
  • R package rms: Regression Modeling Strategies , Regression modeling...
  • PLINK

  • Referenced in 68 articles [sw04581]
  • PLINK is a free, open-source whole genome...
  • KernSmooth

  • Referenced in 1018 articles [sw04586]
  • Kernel smoothing refers to a general methodology for...