• mvis

  • Referenced in 10 articles [sw37353]
  • example of prognostic modeling in breast cancer...
  • dChipSNP

  • Referenced in 6 articles [sw18745]
  • these methods to prostate and breast cancer datasets generates biologically important results. Availability: The software ... biosun1.harvard.edu/complab/dchip/snp/ Supplementary information: The breast cancer data are provided by Andrea L. Richardson, Zhigang...
  • MapSplice

  • Referenced in 6 articles [sw31868]
  • algorithm. Splice junctions derived from eight breast cancer RNA-seq datasets recapitulated the extensiveness ... differences between molecular subtypes of breast cancer. These combined results indicate that MapSplice...
  • SciClone

  • Referenced in 6 articles [sw29660]
  • massively-parallel sequencing has confirmed that most cancers are oligoclonal, with subpopulations of neoplastic cells ... subclones in acute myeloid leukemia and breast cancer samples that, though present at disease onset...
  • jHoles

  • Referenced in 6 articles [sw15020]
  • systems (e.g., evolution dynamics, brain correlation, breast cancer diagnosis, etcdots). In this paper, we propose...
  • CARAT

  • Referenced in 6 articles [sw35399]
  • allelic TaqMan reactions with several human breast cancer cell lines. The sensitivity and specificity...
  • PedGenie

  • Referenced in 4 articles [sw35514]
  • NBS1, and their association with female breast cancer in 462 cases and 572 controls selected ... negative from 139 high-risk Utah breast cancer families...
  • CAMERA

  • Referenced in 5 articles [sw30339]
  • detecting genuine differential expression. Analysis of breast cancer data shows that CAMERA recovers known relationships...
  • SNVMix

  • Referenced in 4 articles [sw29569]
  • matched genotyping arrays and a human breast cancer genome sequenced to >40× (haploid) coverage with...
  • BayesMendel

  • Referenced in 5 articles [sw11022]
  • includes two major cancer syndromes: the breast-ovarian cancer syndrome and the hereditary non-polyposis...
  • LncDisease

  • Referenced in 2 articles [sw34250]
  • predicted the lncRNAs associated with breast cancer and hypertension. The breast-cancer-associated lncRNAs were ... lncRNAs could be validated in both breast cancer cell lines. The hypertension-associated lncRNAs were...
  • breastCancerVDX

  • Referenced in 3 articles [sw14728]
  • package. Gene expression data from a breast cancer study published by Wang...
  • mma

  • Referenced in 3 articles [sw19445]
  • Application to Explore Racial Disparity in Breast Cancer Survival”, published on Journal of Biometrics & Biostatistics...
  • CoClust

  • Referenced in 3 articles [sw19990]
  • CoClust to real microarray data of breast-cancer patients...
  • GemIdent

  • Referenced in 3 articles [sw12192]
  • concerning immune profiles of lymphnodes in breast cancer patients. Hence, GemIdent works well when identifying...
  • compHclust

  • Referenced in 3 articles [sw19128]
  • microarray data set from 295 breast cancer patients, using clustering with the correlation-based distance...
  • SmoothHR

  • Referenced in 3 articles [sw11464]
  • using data from a study on breast cancer and data on acute coronary syndrome, from...
  • dmGWAS

  • Referenced in 3 articles [sw29291]
  • GWAS datasets for complex diseases, i.e. breast cancer and pancreatic cancer. For each disease...
  • Genefu

  • Referenced in 1 article [sw18970]
  • gene expression-based signatures in breast cancer. Summary: Breast cancer is one of the most ... studies into the molecular heterogeneity of breast cancer have produced a plethora of molecular subtype ... molecular subtyping and prognostication in breast cancer. Availability and implementation: The genefu package is available...