• caGrid

  • Referenced in 10 articles [sw20965]
  • address this need the National Cancer Institute (NCI) has initiated a national-scale effort, called...
  • Oncomine

  • Referenced in 7 articles [sw17289]
  • microarrays have been widely applied to cancer transcriptome analysis; however, the majority of such data ... Oncomine, a bioinformatics initiative aimed at collecting, standardizing, analyzing, and delivering cancer transcriptome data ... cancer types and subtypes. Here, we provide an update on the initiative, describe the database...
  • 3D Slicer

  • Referenced in 8 articles [sw25754]
  • National Cancer Institute began building the Quantitative Imaging Network (QIN) initiative with the goal...
  • DINGO

  • Referenced in 4 articles [sw29317]
  • analysis in genomics. Motivation: Cancer progression and development are initiated by aberrations in various molecular ... passenger events in the elucidation of cancer progression and development. Results: Simulation studies demonstrate that...
  • DUET

  • Referenced in 1 article [sw16881]
  • integrated computational approach. Cancer genome and other sequencing initiatives are generating extensive data...
  • EQSIRT

  • Referenced in 1 article [sw13415]
  • developed with funding by the U.S. National Cancer Institute through a Small Business Innovation Research ... Patient Reported Outcomes (PROMIS) initiative...
  • PGTools

  • Referenced in 1 article [sw31812]
  • utility of PGTools using a colorectal cancer data set that led to the identification ... individual proteogenomic investigations as well as international initiatives such as chromosome-centric Human Proteome Project...
  • ACOMCD

  • Referenced in 2 articles [sw40215]
  • colony optimization (ACO) approach. In the initial stage, SaTScan is first used to mark ... shaped clusters. A case study on esophageal cancer in eastern China further validates the correctness...
  • ADOL-C

  • Referenced in 249 articles [sw00019]
  • ADOL-C: Automatic Differentiation of C/C++. We present...
  • CoCoA

  • Referenced in 654 articles [sw00143]
  • CoCoA is a system for Computations in Commutative...
  • Diffpack

  • Referenced in 115 articles [sw00203]
  • As modern programming methodologies migrate from computer science...
  • LANCELOT

  • Referenced in 306 articles [sw00500]
  • LANCELOT. A Fortran package for large-scale nonlinear...
  • LGS

  • Referenced in 15 articles [sw00517]
  • In the paper we present LGS -- a geometric...
  • Macaulay2

  • Referenced in 1923 articles [sw00537]
  • Macaulay2 is a software system devoted to supporting...
  • Maple

  • Referenced in 5373 articles [sw00545]
  • The result of over 30 years of cutting...
  • MATCONT

  • Referenced in 443 articles [sw00551]
  • MATCONT: Matlab software for bifurcation study of dynamical...
  • Mathematica

  • Referenced in 6355 articles [sw00554]
  • Almost any workflow involves computing results, and that...
  • Matlab

  • Referenced in 13544 articles [sw00558]
  • MATLAB® is a high-level language and interactive...
  • mclust

  • Referenced in 309 articles [sw00563]
  • R package mclust: Normal Mixture Modeling for Model...
  • MooNMD

  • Referenced in 76 articles [sw00592]
  • The basis of mapped finite element methods are...