
OKVARBoost
 Referenced in 3 articles
[sw24063]
 regulatory networks. MOTIVATION: Reverse engineering of gene regulatory networks remains a central challenge in computational ... network inference for the proposed model. Specifically, at each boosting iteration, a regularized Operatorvalued ... Engineering and Modeling Assessment (IRMA) and Tcell networks. The highquality results obtained strongly ... existing approaches. AVAILABILITY: The OKVARBoost Matlab code is available as the archive: http://amisgroup.fr...

Mathematica
 Referenced in 6075 articles
[sw00554]
 Almost any workflow involves computing results, and that...

Matlab
 Referenced in 12557 articles
[sw00558]
 MATLAB® is a highlevel language and interactive...

R
 Referenced in 8776 articles
[sw00771]
 R is a language and environment for statistical...

SageMath
 Referenced in 1741 articles
[sw00825]
 Sage (SageMath) is free, opensource math software...

SUNDIALS
 Referenced in 220 articles
[sw00927]
 SUNDIALS was implemented with the goal of providing...

PRISM
 Referenced in 423 articles
[sw01186]
 PRISM: Probabilistic symbolic model checker. In this paper...

Graphviz
 Referenced in 85 articles
[sw01283]
 Graphviz is open source graph visualization software. Graph...

STAR
 Referenced in 13 articles
[sw02515]
 STAR: ultrafast universal RNAseq aligner. Motivation: Accurate...

NEURON
 Referenced in 180 articles
[sw03059]
 Parallel network simulations with NEURON. The NEURON simulation...

IF2.0
 Referenced in 46 articles
[sw03303]
 IF2.0: A validation environment for componentbased...

SPIN
 Referenced in 715 articles
[sw03455]
 Spin is a popular opensource software tool...

UCIml
 Referenced in 3127 articles
[sw04074]
 UC Irvine Machine Learning Repository. We currently maintain...

COMSOL
 Referenced in 395 articles
[sw04091]
 The COMSOL Multiphysics engineering simulation software environment facilitates...

Bioconductor
 Referenced in 307 articles
[sw04205]
 Bioconductor provides tools for the analysis and comprehension...

CRAN
 Referenced in 498 articles
[sw04351]
 R is ‘GNU S’, a freely available language...

CVX
 Referenced in 745 articles
[sw04594]
 CVX is a modeling system for constructing and...

YALMIP
 Referenced in 963 articles
[sw04595]
 YALMIP Yet another LMI parser. YALMIP is a...

Rfam
 Referenced in 33 articles
[sw04637]
 The Rfam database is a collection of RNA...

LIBSVM
 Referenced in 1114 articles
[sw04879]
 LIBSVM is a library for Support Vector Machines...