
OKVARBoost
 Referenced in 3 articles
[sw24063]
 regulatory networks. MOTIVATION: Reverse engineering of gene regulatory networks remains a central challenge in computational ... network inference for the proposed model. Specifically, at each boosting iteration, a regularized Operatorvalued ... Engineering and Modeling Assessment (IRMA) and Tcell networks. The highquality results obtained strongly ... existing approaches. AVAILABILITY: The OKVARBoost Matlab code is available as the archive: http://amisgroup.fr...

Macaulay2
 Referenced in 1958 articles
[sw00537]
 Macaulay2 is a software system devoted to supporting...

Mathematica
 Referenced in 6445 articles
[sw00554]
 Almost any workflow involves computing results, and that...

Matlab
 Referenced in 13702 articles
[sw00558]
 MATLAB® is a highlevel language and interactive...

R
 Referenced in 10196 articles
[sw00771]
 R is a language and environment for statistical...

SageMath
 Referenced in 2033 articles
[sw00825]
 Sage (SageMath) is free, opensource math software...

SINGULAR
 Referenced in 1522 articles
[sw00866]
 SINGULAR is a Computer Algebra system (CAS) for...

SUNDIALS
 Referenced in 246 articles
[sw00927]
 SUNDIALS was implemented with the goal of providing...

PRISM
 Referenced in 454 articles
[sw01186]
 PRISM: Probabilistic symbolic model checker. In this paper...

Graphviz
 Referenced in 93 articles
[sw01283]
 Graphviz is open source graph visualization software. Graph...

STAR
 Referenced in 14 articles
[sw02515]
 STAR: ultrafast universal RNAseq aligner. Motivation: Accurate...

NEURON
 Referenced in 189 articles
[sw03059]
 Parallel network simulations with NEURON. The NEURON simulation...

IF2.0
 Referenced in 46 articles
[sw03303]
 IF2.0: A validation environment for componentbased...

SPIN
 Referenced in 727 articles
[sw03455]
 Spin is a popular opensource software tool...

UCIml
 Referenced in 3444 articles
[sw04074]
 UC Irvine Machine Learning Repository. We currently maintain...

COMSOL
 Referenced in 460 articles
[sw04091]
 The COMSOL Multiphysics engineering simulation software environment facilitates...

Bioconductor
 Referenced in 328 articles
[sw04205]
 Bioconductor provides tools for the analysis and comprehension...

Simulink
 Referenced in 820 articles
[sw04348]
 Simulink® is an environment for multidomain simulation and...

CRAN
 Referenced in 570 articles
[sw04351]
 R is ‘GNU S’, a freely available language...

CVX
 Referenced in 855 articles
[sw04594]
 CVX is a modeling system for constructing and...