• OKVAR-Boost

  • Referenced in 3 articles [sw24063]
  • regulatory networks. MOTIVATION: Reverse engineering of gene regulatory networks remains a central challenge in computational ... network inference for the proposed model. Specifically, at each boosting iteration, a regularized Operator-valued ... Engineering and Modeling Assessment (IRMA) and T-cell networks. The high-quality results obtained strongly ... existing approaches. AVAILABILITY: The OKVAR-Boost Matlab code is available as the archive: http://amis-group.fr...
  • Macaulay2

  • Referenced in 1958 articles [sw00537]
  • Macaulay2 is a software system devoted to supporting...
  • Mathematica

  • Referenced in 6445 articles [sw00554]
  • Almost any workflow involves computing results, and that...
  • Matlab

  • Referenced in 13702 articles [sw00558]
  • MATLAB® is a high-level language and interactive...
  • R

  • Referenced in 10196 articles [sw00771]
  • R is a language and environment for statistical...
  • SageMath

  • Referenced in 2033 articles [sw00825]
  • Sage (SageMath) is free, open-source math software...
  • SINGULAR

  • Referenced in 1522 articles [sw00866]
  • SINGULAR is a Computer Algebra system (CAS) for...
  • SUNDIALS

  • Referenced in 246 articles [sw00927]
  • SUNDIALS was implemented with the goal of providing...
  • PRISM

  • Referenced in 454 articles [sw01186]
  • PRISM: Probabilistic symbolic model checker. In this paper...
  • Graphviz

  • Referenced in 93 articles [sw01283]
  • Graphviz is open source graph visualization software. Graph...
  • STAR

  • Referenced in 14 articles [sw02515]
  • STAR: ultrafast universal RNA-seq aligner. Motivation: Accurate...
  • NEURON

  • Referenced in 189 articles [sw03059]
  • Parallel network simulations with NEURON. The NEURON simulation...
  • IF-2.0

  • Referenced in 46 articles [sw03303]
  • IF-2.0: A validation environment for component-based...
  • SPIN

  • Referenced in 727 articles [sw03455]
  • Spin is a popular open-source software tool...
  • UCI-ml

  • Referenced in 3444 articles [sw04074]
  • UC Irvine Machine Learning Repository. We currently maintain...
  • COMSOL

  • Referenced in 460 articles [sw04091]
  • The COMSOL Multiphysics engineering simulation software environment facilitates...
  • Bioconductor

  • Referenced in 328 articles [sw04205]
  • Bioconductor provides tools for the analysis and comprehension...
  • Simulink

  • Referenced in 820 articles [sw04348]
  • Simulink® is an environment for multidomain simulation and...
  • CRAN

  • Referenced in 570 articles [sw04351]
  • R is ‘GNU S’, a freely available language...
  • CVX

  • Referenced in 855 articles [sw04594]
  • CVX is a modeling system for constructing and...