
bootlib
 Referenced in 426 articles
[sw40642]
 David Hinkley. Bootstrap methods are computerintensive methods of statistical analysis using simulation to obtain...

spBayes
 Referenced in 365 articles
[sw10160]
 such models involves computationally intensive Markov chain Monte Carlo (MCMC) methods whose efficiency depends upon ... package, spBayes, built upon the R statistical computing platform that implements a generalized template encompassing...

RAxML
 Referenced in 44 articles
[sw07716]
 large phylogenetic trees with statistical methods is computationally intensive. We recently introduced simple heuristics which...

bayesm
 Referenced in 66 articles
[sw06787]
 methods stemming from prior exposure to econometrics. This can be overcome by an intense course ... primarily due to the emphasis on statistical computing. This is facilitated by our R package ... bayesm, which provides efficient implementation of advanced methods and models...

PSMIX
 Referenced in 5 articles
[sw13670]
 practice. However, these Bayesian methods demand intensive computation resources and may run into convergence problem ... package based on maximum likelihood method using expectationmaximization algorithm, for inference of population stratification...

waLBerla
 Referenced in 21 articles
[sw01472]
 computing and communication intensive codes like free surface lattice Boltzmann. This method is used...

HMMER
 Referenced in 19 articles
[sw10514]
 probabilistic methods. Previously, HMMER has mainly been available only as a computationally intensive UNIX command ... database searches return within a few seconds. Methods are available for searching either a single...

Elastix
 Referenced in 19 articles
[sw11747]
 elastix: A Toolbox for IntensityBased Medical Image Registration. Medical image registration is an important ... from different modalities (e.g., magnetic resonance and computed tomography), different time points (e.g., follow ... population studies). A large number of methods for image registration are described in the literature ... developed elastix, a publicly available computer program for intensitybased medical image registration. The software...

MURPAR
 Referenced in 2 articles
[sw29666]
 biological data. We believe that our method is especially important for rapidly obtaining estimates ... further refined by more detailed and computeintensive methods...

StateTrace
 Referenced in 3 articles
[sw16861]
 confounded by range effects that plague alternative methods, especially when performance is measured ... efficient management of computationally intensive Bayesian methods for quantifying evidence about the outcomes...

Resampling Stats
 Referenced in 12 articles
[sw06019]
 other computerintensive procedures have revolutionized statistics. Resampling is now the method of choice...

LIPSOL
 Referenced in 84 articles
[sw04712]
 solving linear programs by interiorPoint methods. It requires Matlab version 4.0 or later ... hand, utilizing efficient Fortran codes for computationally intensive tasks, LIPSOL also has adequate speed...

SuperFine
 Referenced in 3 articles
[sw29605]
 accurate of these phylogenetic estimation methods are extremely computationally intensive for data sets with more...

iLM2L
 Referenced in 2 articles
[sw16853]
 timeconsuming and laborintensive, several computational methods have been developed for the identification...

PREvaIL
 Referenced in 10 articles
[sw25073]
 experimental methods used for identifying catalytic residues are resource and laborintensive, computational approaches have ... this study, we describe a new computational method called PREvaIL for predicting enzyme catalytic residues...

GAMESS
 Referenced in 40 articles
[sw03002]
 vibrational frequencies, with IR or Raman intensities. Solvent effects may be modeled by the discrete ... Polarizable Continuum Model. Numerous relativistic computations are available, including infinite order two component scalar corrections ... orbit coupling options. The Fragment Molecular Orbital method permits use of many of these sophisticated...

PsN
 Referenced in 2 articles
[sw16113]
 setting and resampling, to advanced computerintensive statistical methods. PsN includes standalone tools...

PsNToolkit
 Referenced in 2 articles
[sw16112]
 Toolkit — A collection of computer intensive statistical methods for nonlinear mixed effect modeling using ... programming library PerlspeaksNONMEM (PsN). Five methods: the Bootstrap, the Jackknife, Loglikelihood Profiling ... supported on shared memory multiprocessor (SMP) computers, Mosix/openMosix clusters and distributed computing environments following...

ASIAN
 Referenced in 3 articles
[sw36771]
 gene regulatory network, and some computational methods have been intensively developed to deduce the gene ... wide variety of data within a reasonable computational time. The server allows users to input...

Feel++
 Referenced in 39 articles
[sw05898]
 nevertheless  encompass a wide range of numerical methods and techniques,  build mathematical software that follows ... rationale being that these applications are computing intensive and the use of an interpreted language...