• Rfam

• Referenced in 33 articles [sw04637]
• families, each represented by multiple sequence alignments, consensus secondary structures and covariance models...

• ARock

• Referenced in 32 articles [sw16800]
• learning, as well as distributed and decentralized consensus problems. Numerical experiments solving sparse logistic regression...

• iPromoter-2L

• Referenced in 22 articles [sw24788]
• types of promoters may share quite similar consensus sequence pattern, and that the promoters ... same type may have considerably different consensus sequences. RESULTS: To overcome such difficulty, using...

• AFRYCA

• Referenced in 18 articles [sw31855]
• AFRYCA 2.0: an improved analysis framework for consensus reaching processes. Consensus reaching processes (CRPs...

• MuPAD-Combinat

• Referenced in 25 articles [sw04933]
• months of discussions and experiments, an enthusiastic consensus emerged in the community to join...

• WebLogo

• Referenced in 25 articles [sw17263]
• more precise description of sequence similarity than consensus sequences and can rapidly reveal significant features...

• D-ADMM

• Referenced in 25 articles [sw28440]
• problems from signal processing and control: average consensus, compressed sensing, and support vector machines...

• CAP3

• Referenced in 17 articles [sw08935]
• sequence alignments of reads, and generation of consensus sequences. The program also uses forward–reverse ... whereas CAP3 often produces fewer errors in consensus sequences than PHRAP. It is easier...

• clue

• Referenced in 19 articles [sw09497]
• including methods for measuring proximity and obtaining consensus and ”secondary” clusterings...

• Java Grande

• Referenced in 18 articles [sw12807]
• Grande Forum (JGF) is to develop community consensus and recommendations for either changes to Java...

• PADRE

• Referenced in 8 articles [sw19160]
• loaded, the software first performs a consensus from which a collection of consensus trees ... constructed. Finally, one of the consensus trees can be used to construct a reticulate network ... case a single tree is loaded, the consensus stage is skipped and the reticulate network ... specified options are provided for both the consensus and network construction methods...

• MAFRA

• Referenced in 15 articles [sw02353]
• nature of the Web makes achieving this consensus across communities difficult, thus, hampering efficient knowledge...

• iRNA-Methyl

• Referenced in 14 articles [sw22439]
• composition. Occurring at adenine (A) with the consensus motif GAC, N(6)-methyladenosine...

• SC3

• Referenced in 8 articles [sw23914]
• consensus clustering of single-cell RNA-seq data. Single-cell RNA-seq enables the quantitative ... global transcriptome profiles. We present single-cell consensus clustering (SC3), a user-friendly tool ... combining multiple clustering solutions through a consensus approach (http://bioconductor.org/packages/SC3). We demonstrate that...

• VarScan

• Referenced in 8 articles [sw27471]
• operating system. SNP, indel, and consensus calling. In addition to detecting variants, VarScan calls consensus...

• MAMMOTH

• Referenced in 11 articles [sw26215]
• score is then compared with well established, consensus manual-based scores and data sets...

• JPred

• Referenced in 7 articles [sw35977]
• JPred: a consensus secondary structure prediction server. An interactive protein secondary structure prediction Internet server ... exploit evolutionary information from multiple sequences. A consensus prediction is also returned which improves...

• CIDEr

• Referenced in 5 articles [sw26599]
• CIDEr: Consensus-based Image Description Evaluation. Automatically describing an image with a sentence ... evaluating image descriptions that uses human consensus. This paradigm consists of three main parts ... method of collecting human annotations to measure consensus, a new automated metric (CIDEr) that captures ... consensus, and two new datasets: PASCAL-50S and ABSTRACT-50S that contain 50 sentences describing...

• T-REX

• Referenced in 9 articles [sw20724]
• complete and partial gene transfers, inference of consensus HGT scenarios and interactive HGT identification, developed...

• USAC

• Referenced in 6 articles [sw42888]
• USAC: a universal framework for random sample consensus. A computational problem that arises frequently ... dealing with data contamination. The random sample consensus (RANSAC) algorithm is one of the most...