• Rfam

  • Referenced in 33 articles [sw04637]
  • families, each represented by multiple sequence alignments, consensus secondary structures and covariance models...
  • ARock

  • Referenced in 32 articles [sw16800]
  • learning, as well as distributed and decentralized consensus problems. Numerical experiments solving sparse logistic regression...
  • iPromoter-2L

  • Referenced in 22 articles [sw24788]
  • types of promoters may share quite similar consensus sequence pattern, and that the promoters ... same type may have considerably different consensus sequences. RESULTS: To overcome such difficulty, using...
  • AFRYCA

  • Referenced in 18 articles [sw31855]
  • AFRYCA 2.0: an improved analysis framework for consensus reaching processes. Consensus reaching processes (CRPs...
  • MuPAD-Combinat

  • Referenced in 25 articles [sw04933]
  • months of discussions and experiments, an enthusiastic consensus emerged in the community to join...
  • WebLogo

  • Referenced in 25 articles [sw17263]
  • more precise description of sequence similarity than consensus sequences and can rapidly reveal significant features...
  • D-ADMM

  • Referenced in 25 articles [sw28440]
  • problems from signal processing and control: average consensus, compressed sensing, and support vector machines...
  • CAP3

  • Referenced in 17 articles [sw08935]
  • sequence alignments of reads, and generation of consensus sequences. The program also uses forward–reverse ... whereas CAP3 often produces fewer errors in consensus sequences than PHRAP. It is easier...
  • clue

  • Referenced in 19 articles [sw09497]
  • including methods for measuring proximity and obtaining consensus and ”secondary” clusterings...
  • Java Grande

  • Referenced in 18 articles [sw12807]
  • Grande Forum (JGF) is to develop community consensus and recommendations for either changes to Java...
  • PADRE

  • Referenced in 8 articles [sw19160]
  • loaded, the software first performs a consensus from which a collection of consensus trees ... constructed. Finally, one of the consensus trees can be used to construct a reticulate network ... case a single tree is loaded, the consensus stage is skipped and the reticulate network ... specified options are provided for both the consensus and network construction methods...
  • MAFRA

  • Referenced in 15 articles [sw02353]
  • nature of the Web makes achieving this consensus across communities difficult, thus, hampering efficient knowledge...
  • iRNA-Methyl

  • Referenced in 14 articles [sw22439]
  • composition. Occurring at adenine (A) with the consensus motif GAC, N(6)-methyladenosine...
  • SC3

  • Referenced in 8 articles [sw23914]
  • consensus clustering of single-cell RNA-seq data. Single-cell RNA-seq enables the quantitative ... global transcriptome profiles. We present single-cell consensus clustering (SC3), a user-friendly tool ... combining multiple clustering solutions through a consensus approach (http://bioconductor.org/packages/SC3). We demonstrate that...
  • VarScan

  • Referenced in 8 articles [sw27471]
  • operating system. SNP, indel, and consensus calling. In addition to detecting variants, VarScan calls consensus...
  • MAMMOTH

  • Referenced in 11 articles [sw26215]
  • score is then compared with well established, consensus manual-based scores and data sets...
  • JPred

  • Referenced in 7 articles [sw35977]
  • JPred: a consensus secondary structure prediction server. An interactive protein secondary structure prediction Internet server ... exploit evolutionary information from multiple sequences. A consensus prediction is also returned which improves...
  • CIDEr

  • Referenced in 5 articles [sw26599]
  • CIDEr: Consensus-based Image Description Evaluation. Automatically describing an image with a sentence ... evaluating image descriptions that uses human consensus. This paradigm consists of three main parts ... method of collecting human annotations to measure consensus, a new automated metric (CIDEr) that captures ... consensus, and two new datasets: PASCAL-50S and ABSTRACT-50S that contain 50 sentences describing...
  • T-REX

  • Referenced in 9 articles [sw20724]
  • complete and partial gene transfers, inference of consensus HGT scenarios and interactive HGT identification, developed...
  • USAC

  • Referenced in 6 articles [sw42888]
  • USAC: a universal framework for random sample consensus. A computational problem that arises frequently ... dealing with data contamination. The random sample consensus (RANSAC) algorithm is one of the most...