• # AFGen

• Referenced in 15 articles [sw06325]
• based descriptors they contain. The descriptor space consists of graph fragments that can have three ... based classification and ranked-retrieval show that these descriptors consistently and statistically outperform previously developed...
• # choix

• Referenced in 2 articles [sw26417]
• between items. Pairwise comparisons: when the data consists of comparisons between two items, the model ... rating system used to rank chess ... players. Partial rankings: when the data consists of rankings over (a subset of) the items ... model arises when the data consists of discrete choices, i.e., we observe the selection...
• # PePr

• Referenced in 1 article [sw34561]
• peak-calling prioritization pipeline (PePr) for identifying consistent or differential binding sites in ChIP ... uses a local variance estimation method, ranking consistent or differential binding sites more favorably than...
• # Algorithm 844

• Referenced in 17 articles [sw04407]
• algorithm, to obtain two kinds of low-rank approximations. The first, the SPQR, approximation ... form $(XR11^{-1})(R11 R12)$, where $X$ consists of columns of $A$. The second...
• # PBoostGA

• Referenced in 3 articles [sw17431]
• genetic algorithm for variable ranking and selection. Variable selection has consistently been a hot topic ... when facing with high-dimensional data. Variable ranking, an advanced form of selection, is actually...
• # BioBayes

• Referenced in 25 articles [sw08082]
• methods of Bayesian inference provide a consistent framework for modelling and predicting in these uncertain ... Bayesian parameter estimation and evidential model ranking over models of biochemical systems defined using ordinary...
• # N-way Toolbox

• Referenced in 30 articles [sw12996]
• multi-way Tucker models; Fitting the generalized rank annihilation method; Fitting the direct trilinear decomposition ... Performing cross-validation of models; Calculating core consistency of PARAFAC models; Using additional diagnostic tools...
• # BayesMallows

• Referenced in 1 article [sw26332]
• rankings, partially missing rankings, as well as consistent pairwise preferences. Several functions for plotting ... partition function (normalizing constant) of the Mallows rank model, both with the importance sampling algorithm...
• # LSRN

• Referenced in 20 articles [sw09555]
• where A may be rank-deficient. Tikhonov regularization may also be included. Since ... fast linear operator. The preconditioning phase consists of a random normal projection, which is embarrassingly...
• # SW1PerS

• Referenced in 7 articles [sw17206]
• evaluated methods, and the only one to consistently classify damped signals as highly periodic ... experiments, the lists of top 10% genes ranked with SW1PerS recover...
• # DiSMEC

• Referenced in 2 articles [sw30154]
• methods, DiSMEC does not make any low rank assumptions on the label matrix. Using double ... parallelization, DiSMEC can learn classifiers for datasets consisting hundreds of thousands labels within few hours ... evaluation on publicly available real-world datasets consisting upto 670,000 labels. We compare DiSMEC ... which is a tree-based approach optimizing ranking based loss function. On some...
• # IDENT

• Referenced in 3 articles [sw30329]
• series and a time series that is consistent with the model. The problem is equivalent ... solved as a mosaic-Hankel structured low-rank approximation problem.Additional nonstandard features of the software...
• # PaxDb

• Referenced in 1 article [sw29371]
• place particular emphasis on deep coverage, consistent post-processing and comparability across different organisms. Publicly ... score and rank each contributing, individual data set by assessing its consistency against externally provided...
• # idr

• Referenced in 7 articles [sw11205]
• assesses when the findings are no longer consistent across replicates. Our curve is fitted ... computed at each set of paired replicate ranks and permits the principled setting of thresholds...
• # hgm R

• Referenced in 18 articles [sw08770]
• linear partial differential equations. The HGM consists of three steps for a given normalizing constant ... numerically solve ordinary differential equation of rank 2^20 =20,148,576. We have developed...