• DGM

  • Referenced in 177 articles [sw39282]
  • solution to the Burgers’ equation for a continuum of different boundary conditions and physical conditions...
  • APBS

  • Referenced in 92 articles [sw05766]
  • equation (PBE), one of the most popular continuum models for describing electrostatic interactions between molecular ... solutes in salty, aqueous media. Continuum electrostatics plays an important role in several areas...
  • PPM

  • Referenced in 64 articles [sw00728]
  • particle-mesh library for the simulation of continuum systems The Parallel Particle Mesh (PPM) library...
  • PDB2PQR

  • Referenced in 35 articles [sw13087]
  • setup of Poisson–Boltzmann electrostatics calculations. Continuum solvation models, such as Poisson–Boltzmann and Generalized ... radii. Unfortunately, the limiting step in continuum electrostatics calculations is often the addition of missing ... common tasks of preparing structures for continuum electrostatics calculations, including adding a limited number ... accessibility to the biological community of continuum electrostatics analyses of biomolecular systems...
  • Numba

  • Referenced in 57 articles [sw21554]
  • supported by Anaconda, Inc. (formerly known as Continuum Analytics) and The Gordon and Betty Moore...
  • RIPPLE

  • Referenced in 57 articles [sw30642]
  • volume force derived from the continuum surface force ( CSF) model. A two-step projection method...
  • GAMESS

  • Referenced in 40 articles [sw03002]
  • discrete Effective Fragment potentials, or continuum models such as the Polarizable Continuum Model. Numerous relativistic...
  • ShearLab

  • Referenced in 54 articles [sw06721]
  • provides a unified treatment of both the continuum and digital realms. Second, we analyze...
  • PERMIX

  • Referenced in 24 articles [sw09519]
  • DYNA and GMSH. Fracture on the continuum level is modeled by the extended finite element ... concurrent multiscale methods for fracture, coupling two continuum domains or atomistic domains to continuum domains...
  • BLOOMP

  • Referenced in 28 articles [sw06454]
  • coherent sensing matrices arise in discretization of continuum imaging problems such as radar and medical...
  • CompuCell3D

  • Referenced in 23 articles [sw34248]
  • such a simulation, based on the hybrid (continuum-discrete) model of Picioreanu, van Loosdrecht...
  • FLAC3D

  • Referenced in 21 articles [sw07604]
  • kind of geotechnical engineering project where continuum analysis is necessary...
  • FLAG

  • Referenced in 10 articles [sw09041]
  • material. Modeling such phenomena in a continuum hydrodynamics code challenges the assumptions underlying the numerical ... descriptions of ejecta that are compatible with continuum mechanics. Earlier work documents an initial effort ... FLAG hydrocode. The FLAG hydrocode computes continuum mechanics solutions for fluid and solid materials ... model ejecta in FLAG, a hybrid particle-continuum representation was defined that allows for coupling...
  • MFIX-DEM

  • Referenced in 10 articles [sw18199]
  • using an Eulerian reference frame for the continuum fluid and a Lagrangian discrete framework (Discrete ... This method is referred to as the continuum discrete method (CDM) to clearly make ... Lagrangian or Eulerian reference for either continuum or discrete formulations. This freely available CDM code ... lead to better closures for the continuum modeling (or traditionally referred to as two fluid...
  • pertsaus2

  • Referenced in 18 articles [sw15442]
  • representation by locating points on a continuum. Approximating dissimilarities by the absolute value...
  • Y-Geo

  • Referenced in 12 articles [sw30877]
  • numerical technique that combines the advantages of continuum-based modeling approaches and discrete element methods ... ability to explicitly model the transition from continuum to discontinuous behavior by fracture and fragmentation...
  • DROPS

  • Referenced in 17 articles [sw12825]
  • techniques; Level set methods for interface capturing; Continuum surface force approach for the treatment...
  • VAMUCH

  • Referenced in 15 articles [sw13343]
  • total electromagnetic enthalpy of the heterogeneous continuum, we formulate the micromechanics model as a constrained...
  • ARVO

  • Referenced in 14 articles [sw00049]
  • useful for computing the percolation probability of continuum percolation models...
  • voFoam

  • Referenced in 11 articles [sw26604]
  • framework of the OpenFOAM library for Computational Continuum Mechanics (CCM) using the C++ programming language...