• FDRSeg

  • Referenced in 14 articles [sw16730]
  • FDR-control in multiscale change-point segmentation. Fast multiple change-point segmentation methods, which additionally ... segmentation method, FDRSeg, which controls the false discovery rate (FDR) in the sense that...
  • ORIOGEN

  • Referenced in 16 articles [sw07654]
  • that of the false discovery rate (FDR) relies on the number of bootstraps used ... bootstrap calculations while ensuring the control of the FDR. The proposed algorithm results...
  • colcor

  • Referenced in 5 articles [sw12289]
  • gene, and apply false discovery rate (FDR) controlling methods to find interesting genes. For example ... difference in expression levels between treatment and control groups and we could seek differentially expressed ... empirical cdf of Z is important for FDR methods, since its mean and variance determine...
  • smoothfdr

  • Referenced in 4 articles [sw27319]
  • spatial structure in large multiple-testing problems. FDR smoothing automatically finds spatially localized regions ... tightens it elsewhere, in a manner that controls the overall false-discovery rate ... plausible than those detected by existing FDR-controlling methods. For a detailed description...
  • someMTP

  • Referenced in 4 articles [sw11118]
  • FDR control with pseudo-gatekeeping based on a possibly data driven order of the hypotheses...
  • fuzzyFDR

  • Referenced in 2 articles [sw15397]
  • rules for multiple testing. Choose to control FDR (false discovery rate) using the Benjamini...
  • fdrDiscreteNull

  • Referenced in 2 articles [sw24761]
  • weighted or adaptive FDR procedures for FDR control and estimation in the discrete paradigm...
  • rope

  • Referenced in 1 article [sw21810]
  • package rope: Model Selection with FDR Control of Selected Variables. Selects one model with variable ... selection FDR controlled at a specified level. A q-value for each potential variable...
  • seq.f95

  • Referenced in 7 articles [sw25839]
  • steps in an FDR procedure can be used to control the number or proportion ... values makes possible efficient use of the FDR procedures for very large numbers of hypotheses...
  • FixSeqMTP

  • Referenced in 1 article [sw17932]
  • proposed three Family-wise Error Rate (FWER) controlling g-FSMTPs utilize numbers of rejections ... proposed two False Discovery Rate (FDR) controlling g-FSMTPs allows more but a given number...
  • CARS

  • Referenced in 1 article [sw31335]
  • asymptotically valid and optimal for FDR control. For more information, please see the website...
  • multtest

  • Referenced in 22 articles [sw08262]
  • testing procedures (including empirical Bayes methods) for controlling the family-wise error rate (FWER), generalized ... false positives (TPPFP), and false discovery rate (FDR). Several choices of bootstrap-based null distribution...
  • dSTEM

  • Referenced in 3 articles [sw36073]
  • values, provides asymptotic strong control of the False Discovery Rate (FDR) and power consistency...
  • ROCS

  • Referenced in 0 articles [sw16682]
  • under the Surface (VUS) and the FDR-Controlled Area Under the Curve (FCAUC), and conducts...
  • ERP

  • Referenced in 1 article [sw30310]
  • package are the classical FDR- and FWER-controlling procedures, also available using function p.adjust...
  • qvalue

  • Referenced in 8 articles [sw22383]
  • value estimation for false discovery rate control. This package takes a list of p-values ... estimates their q-values and local FDR values. The q-value of a test measures...
  • MRPC

  • Referenced in 1 article [sw24677]
  • accuracy results from online control of the false discovery rate (FDR) that reduces false positive...
  • multitest

  • Referenced in 2 articles [sw08130]
  • testing procedures (including empirical Bayes methods) for controlling the family-wise error rate (FWER), generalized ... false positives (TPPFP), and false discovery rate (FDR). Several choices of bootstrap-based null distribution...
  • EFICAz

  • Referenced in 3 articles [sw35281]
  • enzyme families obtained by a Conservation-controlled HMM Iterative procedure for Enzyme Family classification (CHIEFc ... multiple Prosite patterns of high specificity. For FDR (i.e. conserved positions in an enzyme family...
  • MiniSat

  • Referenced in 541 articles [sw00577]
  • An extensible SAT-solver. MiniSat is a minimalistic...