
PSwarm
 Referenced in 66 articles
[sw00742]
 search method, or more specifically, a coordinate search method, which guarantees convergence to stationary points ... optional) search step of coordinate search, the algorithm incorporates a particle swarm scheme for dissemination...

MCS
 Referenced in 69 articles
[sw14657]
 Global Optimization by Multilevel Coordinate Search. MCS is a Matlab program for bound constrained global ... values only, based on a multilevel coordinate search that balances global and local search...

veriSoft
 Referenced in 91 articles
[sw01489]
 VeriSoft automatically searches for coordination problems (deadlocks, etc.) and assertion violations in a software system...

IMFIL
 Referenced in 40 articles
[sw04814]
 higher derivatives, implicit filtering builds upon coordinate search and then interpolates to get an approximation...

simannf90
 Referenced in 118 articles
[sw05059]
 iterative random search procedure with adaptive moves along the coordinate directions. It permits uphill moves ... NelderMead method and the adaptive random search method of the reviewer), being always able...

MSO
 Referenced in 5 articles
[sw35041]
 objective function domain over multiple scales in search for the global optimum. For such algorithms ... namely, Lipschitzian optimization methods, multilevel coordinate search, dividing rectangles, and optimistic optimization methods have...

MISO
 Referenced in 6 articles
[sw20541]
 that combine different sampling strategies and local search to obtain highaccuracy solutions. We compare ... MISO algorithm that combines a coordinate perturbation search with a target value strategy...

L0Learn
 Referenced in 11 articles
[sw36841]
 algorithms are based on coordinate descent and local combinatorial search. For more details, check...

GLS
 Referenced in 1 article
[sw12691]
 Matlab line search routines. GLS is a Matlab program for univariate local or global optimization ... used for global coordinate searches by choosing as search direction p a vector with...

Rchaosoptimiser
 Referenced in 1 article
[sw07892]
 wave algorithm, the chaosbased cyclical coordinate search method and the second wave carrier algorithm...

D*Lite
 Referenced in 6 articles
[sw20991]
 from given start coordinates to given goal coordinates in unknown terrain. In this case, they ... heuristic search method that repeatedly determines a shortest path from the current robot coordinates ... goal coordinates while the robot moves along the path. It is able to replan ... planning from scratch since it modifies previous search results locally. Consequently, it has been extensively...

ConfBuster
 Referenced in 1 article
[sw27289]
 analysis and visualisation of the conformational search results. Coordinate sets of single molecules in MOL2 ... lower energy conformation coordinates is returned as output, as well as PyMOL script and graphics ... only opensource tools for macrocycle conformational search available to the scientific community...

IDBADOPT
 Referenced in 2 articles
[sw02746]
 ADOPT: A depthfirst search DCOP algorithm. Many agent coordination problems can be modeled ... problems. ADOPT is an asynchronous and distributed search algorithm that is able to solve DCOP...

PyBerny
 Referenced in 1 article
[sw33442]
 internal coordinates, an iterative Hessian approximation, a trust region scheme, and linear search. The algorithm ... welcome): crystal geometries, coordinate constraints, coordinate weighting, transition state search. PyBerny is available in PySCF...

MinRMS
 Referenced in 2 articles
[sw26877]
 within a heuristically limited search space. The alignment algorithm uses coordinates of alphacarbon atoms ... protein sequences. For practical purposes, the search is exhaustive. The method is fast enough...

AHFinderDirect
 Referenced in 25 articles
[sw04972]
 assume that an AH to be searched for is a Strahlkörper (`starshaped region’) with ... Cartesiancoordinate spatial derivatives of g ij . I discretize S 2 using six angular patches...

TRIPACK
 Referenced in 15 articles
[sw00978]
 constraint regions) while retaining the efficiency of searching and updating a convex triangulation. The package ... locations in addition to the $2N$ nodal coordinates...

RapidPolygonLookup
 Referenced in 1 article
[sw24246]
 trees. Facilitates efficient polygon search using kd trees. Coordinate level spatial data can be aggregated ... exploit kdtrees as efficient nearest neighbor search algorithm to dramatically reduce the effective number...

DICE
 Referenced in 2 articles
[sw02641]
 coordinationbased framework for distributed constraint solving. This paper gives an overview of DICE (DIstributed ... incomplete) solvers, (3) splitting strategies, to build search trees, and (4) search strategies ... traverse these search trees. DICE is implemented using the Manifold coordination language, and coordinates...

ArchPRED
 Referenced in 2 articles
[sw17375]
 www.fiserlab.org/servers/archpred) implements a novel fragmentsearch based method for predicting loop conformations. The inputs ... server are the atomic coordinates of the query protein and the position of the loop ... fragments from a regularly updated loop library (Search Space) by matching the length, the types...