• XMill

  • Referenced in 33 articles [sw12312]
  • data. We describe a tool for compressing XML data, with applications in data exchange ... archiving, which usually achieves about twice the compression ratio of gzip at roughly the same ... order to apply them to heterogeneous XML data: it uses zlib, the library function...
  • NESTA

  • Referenced in 133 articles [sw06576]
  • image reconstruction from indirect and possibly undersampled data is a topic of considerable interest ... literature in the recent field of compressed sensing is already quite immense. This paper applies...
  • DYNAMIC

  • Referenced in 5 articles [sw32484]
  • framework of dynamic data structures for string processing. In this paper we present DYNAMIC ... open-source C++ library implementing dynamic compressed data structures for string manipulation. Our framework includes ... searchable partial sums, succinct/gap-encoded bitvectors, and entropy/run-length compressed strings and FM indexes. We prove close ... that algorithms making use of dynamic compressed data structures can be up to three orders...
  • CMPGRD

  • Referenced in 110 articles [sw24156]
  • analysis of the composite grid output and data structure is also presented. Some techniques ... shown. Applications to the solution of the compressible Navier-Stokes equations are discussed. Numerical accuracy...
  • tthresh

  • Referenced in 4 articles [sw27855]
  • TTHRESH: Tensor Compression for Multidimensional Visual Data. Memory and network bandwidth are decisive bottlenecks when ... applications, and they increasingly demand suitable data compression strategies. We introduce a novel lossy compression ... coding to compress the HOSVD transform coefficients. Our scheme degrades the data particularly smoothly ... ability to manipulate data at very small cost in the compression domain, for example...
  • S+WAVELETS

  • Referenced in 38 articles [sw12244]
  • diverse as data visualization and analysis, nonparametric statistical estimation, signal and image compression, signal processing...
  • SPLIB

  • Referenced in 9 articles [sw22038]
  • matrix must be in a specific data structure: compressed sparse row. This stores the nonzero...
  • TuckerMPI

  • Referenced in 3 articles [sw27856]
  • /MPI Software Package for Large-scale Data Compression via the Tucker Tensor Decomposition. Our goal ... compression of massive-scale grid-structured data, such as the multi-terabyte output ... parallel C++/MPI software package for compressing distributed data. The approach is based on treating ... approximation of the original tensor-structured data. Compression efficiency is achieved by detecting latent global...
  • CartGen

  • Referenced in 5 articles [sw00107]
  • generation, applying a simple and efficient data compression method permits to store all grid levels...
  • SlimGene

  • Referenced in 3 articles [sw34314]
  • Compressing Genomic Sequence Fragments Using SlimGene. With the advent of next generation sequencing technologies ... development, making it tempting to store sequencing data for long periods of time so that ... transfer very large volumes of data. Compression can be achieved at many levels, including trace ... level (compressing image data), sequence level (compressing a genomic sequence), and fragment-level (compressing...
  • Tabix

  • Referenced in 4 articles [sw28170]
  • seek function calls per query, data compression with gzip compatibility and direct FTP/HTTP access. Tabix ... enables genome viewers to support huge data files and remote custom tracks over networks. Availability...
  • XZ Utils

  • Referenced in 4 articles [sw36397]
  • Utils is free general-purpose data compression software with a high compression ratio. XZ Utils...
  • Edgebreaker

  • Referenced in 53 articles [sw04117]
  • Edgebreaker is a simple technique for compressing three-dimensional triangle meshes. We introduce here ... describe it in terms of a simple data structure, which we call the Corner Table ... less than 2 bits per triangle. It compresses vertex locations using Touma and Gottsman...
  • rwavelet

  • Referenced in 3 articles [sw33457]
  • block thresholding, linear,...) with applications to data compression or denoising/regression. The core of the code...
  • BDSVDX

  • Referenced in 3 articles [sw35942]
  • scientific computing applications, including dimensionality reduction, data compression and clustering, and computation of pseudo-inverses...
  • RNACompress

  • Referenced in 2 articles [sw35325]
  • employs an efficient grammar-based model to compress RNA sequences and their secondary structures ... effective way for RNA structural data compression; (2) design a suitable model to represent ... informational complexity of the structural data based on compression. Our extensive tests have shown that...
  • PTrie

  • Referenced in 4 articles [sw35790]
  • PTrie: data structure for compressing and storing sets via prefix sharing. Sets and their efficient ... where sets are used as the basic data structure for storing (encodings of) states during ... arbitrary length. The PTrie data structure distinguishes itself by compressing the stored elements while sharing ... provide an efficient implementation of the PTrie data structure under the GPL version 3 license...
  • ISSDC

  • Referenced in 1 article [sw24483]
  • ISSDC: Digram coding based lossless data compression algorithm. In this paper, a new lossless data ... digram coding is introduced. This data compression method uses semi-static dictionaries ... worse than DEFLATE in compression of text and binary data, but better than PNG (which...
  • tbwt

  • Referenced in 2 articles [sw38968]
  • text known to be highly compressible but also useful for sequence analysis, what makes ... highly attractive for lossless data compression. In this paper, we present a new technique...
  • LZO

  • Referenced in 2 articles [sw04450]
  • portable lossless data compression library written in ANSI...