
lsbs
 Referenced in 6 articles
[sw28186]
 density estimators of 2d level sets and highest density regions. It applies a plug...

DeBaCl
 Referenced in 3 articles
[sw23572]
 Python Package for Interactive DEnsityBAsed CLustering. The level set tree approach of Hartigan ... dendrogram of the level sets of a density estimator, this approach offers many advantages ... level set trees, we have written the Python package DeBaCl for DEnsityBAsed CLustering ... recent literature on density clustering. Finally, we show the level set tree framework...

denpro
 Referenced in 1 article
[sw25184]
 visualize multivariate density functions and density estimates with level set trees, (2) visualize level sets ... tail trees, (4) visualize scales of multivariate density estimates with mode graphs and branching maps ... functions and 2D probability content functions. Level set trees visualize mode structure ... shape trees visualize shapes of level sets of unimodal densities, and tail trees visualize connected...

FlowFixer
 Referenced in 5 articles
[sw18117]
 interface computation by using the level set method. We show that it can be applied ... simulation such as velocity, smoke density and image advections. BFECC can be implemented easily ... space and time. When applied to level set evolution, BFECC reduces volume loss signi cantly ... combine these techniques with variable density projection and show that they yield a realistic animations...

GCCA
 Referenced in 11 articles
[sw07376]
 connectivity analysis’ (GCCA) – which provides a core set of methods for performing this analysis ... display networklevel indices of causal connectivity including ‘causal density’ and ‘causal flow’. The toolbox...

HSL_MI28
 Referenced in 15 articles
[sw13376]
 algorithm of Lin and Moré. Both the density of the incomplete factor and the amount ... using extensive numerical experiments involving a large set of test problems arising from a wide ... incomplete factorization preconditioners and to select default settings for HSL_MI28. They also illustrate ... Comparisons are made with ICFS, with a levelbased incomplete factorization code and, finally, with...

DGDFT
 Referenced in 7 articles
[sw41922]
 implementation of the recently developed discontinuous Galerkin density functional theory (DGDFT) [J. Comput. Phys ... Sham equations. The use of the ALB set provides a systematic way to improve ... KohnSham problem for a desired level of accuracy. In particular, DGDFT can reach ... selected inversion (PEXSI) technique to compute electron density, energy and atomic forces, we can make...

ERKALE
 Referenced in 1 article
[sw26730]
 Fock or density‐functional level of theory and supports Gaussian basis sets of arbitrary angular...

CNS
 Referenced in 10 articles
[sw30617]
 structuredetermination language (CNS language), and lowlevel source code. Each layer is accessible ... data structures, such as structure factors, electrondensity maps, and atomic properties. The power ... demonstrated by the implementation of a comprehensive set of crystallographic procedures for phasing, density modification...

CRYSCOR
 Referenced in 5 articles
[sw20310]
 periodic nonconducting systems at the correlated level (presently local second order MøllerPlesset Perturbation ... Electron integrals are efficiently calculated using the density fitting technique (for the closeby pair ... distant pairs). The Dual Basis set scheme allows for an expansion of the virtual space...

DENDIS
 Referenced in 2 articles
[sw33761]
 samples avoids over sampling in high density areas. The inner structure allows for internal optimization ... world data sets and compared to alternative approaches, at conceptual and empirical levels. The numerical...

ARMASA
 Referenced in 2 articles
[sw14903]
 unique program to estimate the power spectral density. The spectrum containing all significant details ... set the amount of smoothing of the raw FFT, the right level of detail...

hbsae
 Referenced in 3 articles
[sw30837]
 used to average over the posterior density for the betweenarea variance. The output includes ... higher aggregation level, and to graphically compare different sets of small area estimates...

DBSCAN++
 Referenced in 1 article
[sw34904]
 DBSCAN which only requires computing the densities for a chosen subset of points. We show ... that attains minimax optimal rates for levelset estimation, a quality that...

parallelMCMCcombine
 Referenced in 3 articles
[sw21115]
 estimate a posterior density given the full data set. Recent Bayesian Markov chain Monto Carlo ... methods have been developed for big data sets that are too large to be analyzed ... long as data values in a single level of the hierarchy are not split into...

SW1PerS
 Referenced in 10 articles
[sw17206]
 quantified under varying noise models, noise levels, sampling densities, and signal shapes. Results on biological ... exploratory analyses. Indeed, by having an initial set of periodic genes with a rich variety...

LSVISM
 Referenced in 3 articles
[sw16158]
 solute–solvent surface tension, bulk solvent density and ionic concentrations, and the dielectric coefficients ... methods that consist mainly of the levelset method for relaxing the VISM freeenergy...

RANLIB
 Referenced in 3 articles
[sw26229]
 library which produces random samples from Probability Density Functions (PDF’s), including Beta, Chisquare ... uniform random numbers generated by a lower level package called RNGLIB. A copy of RNGLIB ... generator can be set to the beginning or end of the current block...

nMoldyn
 Referenced in 2 articles
[sw07359]
 used as a tool set for implementing new analysis modules. This was made possible ... highlevel language, Python, and of modern objectoriented programming techniques. The quantities that ... well as its Fourier transform (the density of states) and its memory function, the angular...

pyrolite
 Referenced in 1 article
[sw33810]
 pyrolite is a set of tools for making the most of your geochemical data ... spiderplots, ternary diagrams, bivariate and ternary density diagrams), and numerous auxiliary utilities. pyrolite ... well suited to being incorporated into universitylevel geochemistry and petrology classes which wish...