• PlantTFDB

  • Referenced in 4 articles [sw17023]
  • ontology (PO), expression information, expert-curated functional description, binding motifs, regulation information, interaction, references ... UniProt, RefSeq, STRING and Entrez Gene. By inferring orthologous groups and constructing phylogenetic trees, evolutionary...
  • depthTools

  • Referenced in 2 articles [sw19773]
  • different statistical tools for the description and analysis of gene expression data based ... visualizing the dispersion of one or various groups of samples (e.g. types of tumors...
  • fixedTimeEvents

  • Referenced in 1 article [sw20632]
  • example, in genetics, is detecting grouping of genes within a genome. Approximations of the distribution ... discrete time of fixed length. A complete description of the probability mass function, the cumulative...
  • Maple

  • Referenced in 5124 articles [sw00545]
  • The result of over 30 years of cutting...
  • Mathematica

  • Referenced in 5957 articles [sw00554]
  • Almost any workflow involves computing results, and that...
  • Matlab

  • Referenced in 12309 articles [sw00558]
  • MATLAB® is a high-level language and interactive...
  • nauty

  • Referenced in 561 articles [sw00611]
  • graph-theoretic program NAUTY: nauty is a program...
  • R

  • Referenced in 8601 articles [sw00771]
  • R is a language and environment for statistical...
  • SageMath

  • Referenced in 1675 articles [sw00825]
  • Sage (SageMath) is free, open-source math software...
  • TSPLIB

  • Referenced in 665 articles [sw00983]
  • TSPLIB is a library of sample instances for...
  • AUTO

  • Referenced in 885 articles [sw01059]
  • AUTO is a software for continuation and bifurcation...
  • Graphviz

  • Referenced in 84 articles [sw01283]
  • Graphviz is open source graph visualization software. Graph...
  • S-PLUS

  • Referenced in 601 articles [sw02892]
  • S-PLUS is a powerful environment for statistical...
  • NEURON

  • Referenced in 179 articles [sw03059]
  • Parallel network simulations with NEURON. The NEURON simulation...
  • DASSL

  • Referenced in 259 articles [sw03174]
  • Subroutine DDASSL uses the backward differentiation formulas of...
  • SeDuMi

  • Referenced in 1191 articles [sw04002]
  • SeDuMi is a Matlab toolbox for solving optimization...
  • UCI-ml

  • Referenced in 3100 articles [sw04074]
  • UC Irvine Machine Learning Repository. We currently maintain...
  • SVMlight

  • Referenced in 261 articles [sw04076]
  • Description (homepage): SVMlight is an implementation of Vapnik...
  • CPLEX

  • Referenced in 2583 articles [sw04082]
  • IBM® ILOG® CPLEX® offers C, C++, Java, .NET...
  • Gurobi

  • Referenced in 530 articles [sw04105]
  • GUROBI OPTIMIZER: State of the Art Mathematical Programming...