• HLLE

  • Referenced in 695 articles [sw06605]
  • largest and smallest signal velocities at the interface. The stability and robustness of the HLLE ... quite robust and efficient but somewhat more diffusive.[5] https://math.nyu.edu/ jbu200/E1GODF.F...
  • parDG

  • Referenced in 21 articles [sw18743]
  • which belong to the class of Diffuse-Interface models. We develop efficient and reliable numerical...
  • DifferentialEquations.jl

  • Referenced in 58 articles [sw23910]
  • delay differential equations, hybrid differential equations, jump diffusions, and (stochastic) partial differential equations. Through extensive ... multiple dispatch, metaprogramming, plot recipes, foreign function interfaces (FFI), and call-overloading, DifferentialEquations.jl offers...
  • MFC

  • Referenced in 4 articles [sw34768]
  • equation thermodynamically-consistent diffuse-interface models we use to handle such flows, which are coupled...
  • URDME

  • Referenced in 26 articles [sw10400]
  • Reaction-Diffusion Master Equation formalism to model the processes under study. An interface...
  • STEPS

  • Referenced in 18 articles [sw17866]
  • STEPS: Modeling and Simulating Complex Reaction-Diffusion Systems with Python. We describe ... Python language improved the user interface of the program STEPS. STEPS is a simulation platform ... modeling and stochastic simulation of coupled reaction-diffusion systems with complex 3-dimensional boundary conditions...
  • ddfermi

  • Referenced in 13 articles [sw21481]
  • open-source software prototype which simulates drift diffusion processes in classical and organic semiconductors ... Boltzmann; multidimensional devices; based on pdelib and interfaced via Python...
  • OpenCMP

  • Referenced in 1 article [sw42101]
  • extensibility. The configuration file-based user interface is intended to be concise, readable, and intuitive ... dominated problems. Finally, OpenCMP implements the diffuse interface method, a form of immersed boundary method...
  • dm

  • Referenced in 2 articles [sw39765]
  • diffusion model toolset with Python and Matlab interfaces...
  • FlowFixer

  • Referenced in 5 articles [sw18117]
  • Correction (BFECC) was recently developed for interface computation by using the level set method ... applied to reduce dissipation and diffusion encountered in various advection steps in uid simulation such...
  • OpenCMISS

  • Referenced in 11 articles [sw11475]
  • embedded coronary flow, and the reaction–diffusion equations that govern the propagation of electrical waves ... also discuss the design of the interfaces that link the sets of physical equations across...
  • Aquarius

  • Referenced in 5 articles [sw26678]
  • first a brief outline of the Clause-Diffusion methodology, with emphasis on the problem ... Aquarius, its design, its features and user interface. We present a set of experiments conducted...
  • dyndimred

  • Referenced in 2 articles [sw33012]
  • Common Format. Provides a common interface for applying dimensionality reduction methods, such as Principal Component ... Analysis (’PCA’), Independent Component Analysis (’ICA’), diffusion maps, Locally-Linear Embedding (’LLE’), t-distributed Stochastic...
  • medInria

  • Referenced in 2 articles [sw25762]
  • open-source. Through an intuitive user interface, medInria offers from standard to cutting-edge processing ... such as 2D/3D/4D image visualization, image registration, diffusion MR processing and tractography...
  • DAFI

  • Referenced in 4 articles [sw34061]
  • Lorenz dynamic system, field inversion for the diffusion equations, and uncertainty quantification. The object-oriented ... different physics problems. It provides a simple interface for the users to supply their domain...
  • BCGSTAB

  • Referenced in 7 articles [sw09045]
  • introduced to track the fluid–solid interface for IBM implementation. A second layer of ghost ... different architectures by solving the 2D diffusion–convection problem and the 3D flow over sphere...
  • Morpheus

  • Referenced in 2 articles [sw34557]
  • models with ordinary differential equations and reaction-diffusion systems. It allows rapid development of multiscale ... rather than programming code. Its graphical user interface supports the entire workflow from model construction...
  • COMODI

  • Referenced in 6 articles [sw02604]
  • code and reusing old one, becomes diffuse. Once mature and widespread, component oriented programming will ... without enforcing compatibility with some newly defined interfaces, knowledge of object-oriented concepts or other...
  • CENTORI

  • Referenced in 2 articles [sw10831]
  • computing the steady-state solutions of a diffusion equation with a pseudo-time derivative ... efficiently parallelised using Message Passing Interface (MPI). Illustrative examples of output from simulations...
  • SWAMP

  • Referenced in 1 article [sw02319]
  • additional procedures with a user-friendly interface. The model is based on the numerical solution ... partial differential equations describing advection-diffusion and biological processes on a two-dimensional rectangular finite ... elements mesh. The hydraulics and advection-diffusion modules model were validated both with experimental tracer ... quality modules. The interactive graphical user interface (GUI) is also shown to represent a simple...