
HLLE
 Referenced in 695 articles
[sw06605]
 largest and smallest signal velocities at the interface. The stability and robustness of the HLLE ... quite robust and efficient but somewhat more diffusive.[5] https://math.nyu.edu/ jbu200/E1GODF.F...

parDG
 Referenced in 21 articles
[sw18743]
 which belong to the class of DiffuseInterface models. We develop efficient and reliable numerical...

DifferentialEquations.jl
 Referenced in 58 articles
[sw23910]
 delay differential equations, hybrid differential equations, jump diffusions, and (stochastic) partial differential equations. Through extensive ... multiple dispatch, metaprogramming, plot recipes, foreign function interfaces (FFI), and calloverloading, DifferentialEquations.jl offers...

MFC
 Referenced in 4 articles
[sw34768]
 equation thermodynamicallyconsistent diffuseinterface models we use to handle such flows, which are coupled...

URDME
 Referenced in 26 articles
[sw10400]
 ReactionDiffusion Master Equation formalism to model the processes under study. An interface...

STEPS
 Referenced in 18 articles
[sw17866]
 STEPS: Modeling and Simulating Complex ReactionDiffusion Systems with Python. We describe ... Python language improved the user interface of the program STEPS. STEPS is a simulation platform ... modeling and stochastic simulation of coupled reactiondiffusion systems with complex 3dimensional boundary conditions...

ddfermi
 Referenced in 13 articles
[sw21481]
 opensource software prototype which simulates drift diffusion processes in classical and organic semiconductors ... Boltzmann; multidimensional devices; based on pdelib and interfaced via Python...

OpenCMP
 Referenced in 1 article
[sw42101]
 extensibility. The configuration filebased user interface is intended to be concise, readable, and intuitive ... dominated problems. Finally, OpenCMP implements the diffuse interface method, a form of immersed boundary method...

dm
 Referenced in 2 articles
[sw39765]
 diffusion model toolset with Python and Matlab interfaces...

FlowFixer
 Referenced in 5 articles
[sw18117]
 Correction (BFECC) was recently developed for interface computation by using the level set method ... applied to reduce dissipation and diffusion encountered in various advection steps in uid simulation such...

OpenCMISS
 Referenced in 11 articles
[sw11475]
 embedded coronary flow, and the reaction–diffusion equations that govern the propagation of electrical waves ... also discuss the design of the interfaces that link the sets of physical equations across...

Aquarius
 Referenced in 5 articles
[sw26678]
 first a brief outline of the ClauseDiffusion methodology, with emphasis on the problem ... Aquarius, its design, its features and user interface. We present a set of experiments conducted...

dyndimred
 Referenced in 2 articles
[sw33012]
 Common Format. Provides a common interface for applying dimensionality reduction methods, such as Principal Component ... Analysis (’PCA’), Independent Component Analysis (’ICA’), diffusion maps, LocallyLinear Embedding (’LLE’), tdistributed Stochastic...

medInria
 Referenced in 2 articles
[sw25762]
 opensource. Through an intuitive user interface, medInria offers from standard to cuttingedge processing ... such as 2D/3D/4D image visualization, image registration, diffusion MR processing and tractography...

DAFI
 Referenced in 4 articles
[sw34061]
 Lorenz dynamic system, field inversion for the diffusion equations, and uncertainty quantification. The objectoriented ... different physics problems. It provides a simple interface for the users to supply their domain...

BCGSTAB
 Referenced in 7 articles
[sw09045]
 introduced to track the fluid–solid interface for IBM implementation. A second layer of ghost ... different architectures by solving the 2D diffusion–convection problem and the 3D flow over sphere...

Morpheus
 Referenced in 2 articles
[sw34557]
 models with ordinary differential equations and reactiondiffusion systems. It allows rapid development of multiscale ... rather than programming code. Its graphical user interface supports the entire workflow from model construction...

COMODI
 Referenced in 6 articles
[sw02604]
 code and reusing old one, becomes diffuse. Once mature and widespread, component oriented programming will ... without enforcing compatibility with some newly defined interfaces, knowledge of objectoriented concepts or other...

CENTORI
 Referenced in 2 articles
[sw10831]
 computing the steadystate solutions of a diffusion equation with a pseudotime derivative ... efficiently parallelised using Message Passing Interface (MPI). Illustrative examples of output from simulations...

SWAMP
 Referenced in 1 article
[sw02319]
 additional procedures with a userfriendly interface. The model is based on the numerical solution ... partial differential equations describing advectiondiffusion and biological processes on a twodimensional rectangular finite ... elements mesh. The hydraulics and advectiondiffusion modules model were validated both with experimental tracer ... quality modules. The interactive graphical user interface (GUI) is also shown to represent a simple...