• Quat-2L

  • Referenced in 15 articles [sw22469]
  • following six subtypes: (1) dimer, (2) trimer, (3) tetramer, (4) pentamer, (5) hexamer...
  • PSICO

  • Referenced in 10 articles [sw10910]
  • test case with experimental data on the dimeric protein Desulforedoxin, the method proposed here supplied...
  • GillespieSSA

  • Referenced in 10 articles [sw21016]
  • Currently the following models are included, decaying-dimerization reaction set, linear chain system, logistic growth...
  • CP2K

  • Referenced in 8 articles [sw15391]
  • transition state optimization using NEB or dimer method. (Detailed overview of features.) CP2K is written...
  • QuatIdent

  • Referenced in 6 articles [sw22479]
  • main quaternary structural attributes: (1) monomer, (2) dimer, (3) trimer, (4) tetramer, (5) pentamer...
  • CheMPS2

  • Referenced in 4 articles [sw17633]
  • lowest states of the carbon dimer were obtained at the DMRG(28 orbitals, 12 electrons ... bond dissociation curve of the carbon dimer was estimated by comparing energies at the DMRG...
  • DiMoVo

  • Referenced in 2 articles [sw35351]
  • protein is monomeric. Telling such ‘crystal dimers’ from real ones remains a difficult task. Results ... between the interfaces of biological and crystal dimers. Using these parameters as descriptors in machine...
  • PDB_Hydro

  • Referenced in 3 articles [sw14705]
  • allowing for the tentative prediction of the dimerization interface in homodimeric proteins, or lipid binding...
  • PhyloGibbs

  • Referenced in 2 articles [sw09376]
  • background” model, an option to search for “dimers” (pairs of motifs with variable spacing...
  • TRAJELIX

  • Referenced in 1 article [sw10942]
  • interacting helical domains of rhodopsin dimers. Quantification of the dynamic structural behavior of alpha-helical...
  • RITSUF

  • Referenced in 1 article [sw11414]
  • finite ansatz to enumerate domino (and monomer-dimer) tilings of ”skinny” plane regions...
  • FemaxxNano

  • Referenced in 1 article [sw16819]
  • performance by analyzing a nanometer sized optical dimer structure, a specific type of optical antenna...
  • BGRMI

  • Referenced in 1 article [sw29320]
  • potential gene regulation mechanisms and TF hetero-dimerization processes in the GRN reconstruction process...
  • COILCHECK

  • Referenced in 1 article [sw30036]
  • quite useful for assessing the energy of dimers that are likely to form coiled-coils...
  • noloco

  • Referenced in 0 articles [sw16795]
  • Applications range from simple dimers to complex structures such as molecular crystals and organic molecules...
  • NCIPLOT

  • Referenced in 0 articles [sw20029]
  • interactions, ...) in systems ranging from small dimers to large biomolecules. NCI (Non-Covalent Interactions...
  • LAPACK

  • Referenced in 1642 articles [sw00503]
  • LAPACK is written in Fortran 90 and provides...
  • Macaulay2

  • Referenced in 1692 articles [sw00537]
  • Macaulay2 is a software system devoted to supporting...
  • Mathematica

  • Referenced in 5957 articles [sw00554]
  • Almost any workflow involves computing results, and that...
  • Matlab

  • Referenced in 12309 articles [sw00558]
  • MATLAB® is a high-level language and interactive...