• hIPPYlib

  • Referenced in 22 articles [sw27290]
  • scalable adjoint-based algorithms for PDE-based deterministic and Bayesian inverse problems. It builds ... FEniCS for the discretization of the PDE and on PETSc for scalable and efficient linear...
  • ADAM

  • Referenced in 8 articles [sw21957]
  • discrete models, but they either lack the algorithmic functionality to analyze complex models deterministically ... provides this and other analysis methods for discrete models. ADAM converts several discrete model types...
  • GIFSMeasureDraw

  • Referenced in 1 article [sw36215]
  • version of the Hutchinson-Barnsley theory providing algorithms to approximate the Hutchinson measure for iterated ... systems (GIFS), complementing the discrete version of the deterministic algorithm considered in our previous work...
  • SABRE

  • Referenced in 7 articles [sw12884]
  • adaptive uniformization (FAU), a direct numerical approximation algorithm for computing transient solutions of biochemical reaction ... interprets either as continuous-time or as discrete-time Markov chains. Besides operating ... stochastic mode, SABRE may also perform a deterministic analysis by directly computing a mean-field...
  • Qsymm

  • Referenced in 1 article [sw38651]
  • Hamiltonians? We present numerically stable, deterministic polynomial time algorithms to solve both of these problems ... treatment extends to all continuous or discrete symmetries of non-interacting lattice or continuum Hamiltonians...
  • CRN++

  • Referenced in 2 articles [sw33637]
  • window , a new language for programming deterministic (mass-action) chemical kinetics to perform computation ... suite of well-known algorithms for discrete and real-valued computation. Open image...
  • Embo

  • Referenced in 1 article [sw38713]
  • method and its variants, such as the Deterministic Information Bottleneck (DIB). Given two random variables ... accessible implementation of the reference algorithm oriented towards ease of use on empirical data ... optimized for the common case of discrete, low-dimensional data. Embo is fast, provides...
  • BARON

  • Referenced in 354 articles [sw00066]
  • BARON is a computational system for solving nonconvex...
  • C-XSC 2.0

  • Referenced in 127 articles [sw00182]
  • A C++ class library for extended scientific computing...
  • FAST16

  • Referenced in 5 articles [sw00262]
  • FAST16: A software program for factorizing polynomials over...
  • GAP

  • Referenced in 3189 articles [sw00320]
  • GAP is a system for computational discrete algebra...
  • Gerris

  • Referenced in 344 articles [sw00341]
  • Gerris is a Free Software program for the...
  • GreatSPN

  • Referenced in 57 articles [sw00384]
  • GreatSPN2.0 is a software package for the modeling...
  • HSL

  • Referenced in 279 articles [sw00418]
  • HSL (formerly the Harwell Subroutine Library) is a...
  • KNITRO

  • Referenced in 197 articles [sw00490]
  • KNITRO is a solver for nonlinear optimization. It...
  • LANCELOT

  • Referenced in 306 articles [sw00500]
  • LANCELOT. A Fortran package for large-scale nonlinear...
  • LAPACK

  • Referenced in 1702 articles [sw00503]
  • LAPACK is written in Fortran 90 and provides...
  • LASS

  • Referenced in 30 articles [sw00505]
  • Local Analysis of Self-Similarity - The LASS tool...
  • Magma

  • Referenced in 3315 articles [sw00540]
  • Computer algebra system (CAS). Magma is a large...