• BBMCSP

  • Referenced in 6 articles [sw17718]
  • exact maximum clique algorithms encode the adjacency matrix in full but when dealing with sparse ... employs a novel sparse encoding for the adjacency matrix. Moreover, it also improves on recent...
  • MemHyb

  • Referenced in 15 articles [sw25194]
  • powerful sequence encoding scheme by fusing position specific scoring matrix and split amino acid composition...
  • Herwig++

  • Referenced in 33 articles [sw10350]
  • Houches Accord to specialized matrix element generators for additional processes. The simulation of Beyond ... allows new models to be added by encoding the Feynman rules of the model ... hadronization model. Hadron decays are simulated using matrix elements, where possible including spin correlations...
  • ileanCoP

  • Referenced in 16 articles [sw09757]
  • encode the characteristics of intuitionistic logic. Our calculus is based on a clausal matrix characterisation...
  • FlipCut

  • Referenced in 2 articles [sw08374]
  • FlipCut supertrees: towards matrix representation accuracy in polynomial time. In computational phylogenetics, supertree methods provide ... exist methods based on encoding the input trees in a matrix, and methods based ... matrix representation method, namely Minimum Flip Supertrees. Here, the input trees are encoded ... 0/1-flips such that the resulting matrix admits a directed perfect phylogeny. We then extend...
  • PyUnfold

  • Referenced in 1 article [sw27048]
  • systematic uncertainties. By building a matrix that encodes a detector’s smearing of the desired...
  • PQSER

  • Referenced in 3 articles [sw22074]
  • vector of the Laplacian matrix associated to the problem, which encodes the set of admissible...
  • LDGM

  • Referenced in 8 articles [sw03195]
  • systematic linear codes with low-density generator matrix (LDGM codes) for channel coding and joint ... both cases, the structures of the LDGM encoder and decoder are shown, and a concatenated...
  • iNR-PhysChem

  • Referenced in 8 articles [sw26878]
  • their subfamilies via physical-chemical property matrix. Nuclear receptors (NRs) form a family of ligand ... metabolism. Human genome contains 48 genes encoding NRs. These receptors have become ... components were derived from a physical-chemical matrix via a series of auto-covariance...
  • CF-GGA

  • Referenced in 18 articles [sw02592]
  • given machine-part (MP) incidence matrix. This paper presents and tests a grouping genetic algorithm ... minimal number of parameters and a straightforward encoding, CF-GGA is able to match solutions...
  • MDL4BMF

  • Referenced in 4 articles [sw28420]
  • Matrix Factorization (BMF)—where data, factors, and matrix product are Boolean—has in recent years ... discuss how to construct an appropriate encoding: starting from a simple and intuitive approach ... highly efficient data-to-model--based encoding for BMF. We extend an existing algorithm ... identify the best Boolean matrix factorization, analyze the complexity of the problem, and perform...
  • EigenCFA

  • Referenced in 3 articles [sw14136]
  • this reduction were “abstract” Church encodings, and encodings of the syntax tree and abstract domains ... vectors and matrices.{par}A straightforward (dense-matrix) implementation of EigenCFA performed slower than...
  • CoAdELL

  • Referenced in 1 article [sw23691]
  • irregular matrix structure. We designed a lightweight index compression scheme based on delta encoding ... integration provides a highly-optimized novel sparse matrix format known as Compressed Adaptive ELL (CoAdELL...
  • heatmaply

  • Referenced in 1 article [sw15591]
  • encoded as a grid of colored cells. The rows and columns of the matrix...
  • mltools

  • Referenced in 0 articles [sw17921]
  • data.table to sparse matrix format with one-hot encoding, fast evaluation metrics, and empirical...
  • kProbLog

  • Referenced in 1 article [sw18492]
  • matrix operations and an algorithm to solve linear systems. Finally we show the encodings...
  • SOSlib

  • Referenced in 4 articles [sw29331]
  • ODEs) derived from a chemical reaction network encoded in the Systems Biology Markup Language (SBML ... representation to construct ODE systems, their Jacobian matrix and other derivatives. CVODES, the sensitivity-enabled...
  • GLUE-IT

  • Referenced in 3 articles [sw33402]
  • Calculator, for finding degenerate codons that encode user-specified sets of amino acids. We also ... size, indel rates and a nucleotide mutation matrix. Output includes amino acid completeness and diversity...
  • PEDEL-AA

  • Referenced in 3 articles [sw33403]
  • Calculator, for finding degenerate codons that encode user-specified sets of amino acids. We also ... size, indel rates and a nucleotide mutation matrix. Output includes amino acid completeness and diversity...
  • HEPTHools

  • Referenced in 3 articles [sw30615]
  • Adinkra height yielding matrix numbers: eigenvalue equivalence classes for minimal four-color adinkras. An adinkra ... adinkras, although an important subclass, do not encode all the information present when ... with these node-lifted adinkras Height Yielding Matrix Numbers (HYMNs) and introduce HYMN equivalence classes...