
CDNA
 Referenced in 9 articles
[sw37103]
 CDNA Program for Statistical Modeling (Compression/Entropy Estimation) of Natural DNA Sequences. This is the software ... results reported in Significantly lower entropy estimates for natural DNA sequences . Its purpose ... Maximization). Our focus in Significantly lower entropy estimates for natural DNA sequences is to better...

minet
 Referenced in 7 articles
[sw08432]
 genetogene interaction. Four different entropy estimators are made available in the package minet...

npeet
 Referenced in 2 articles
[sw14336]
 Parametric Entropy Estimation Toolbox (NPEET). This package contains Python code implementing several entropy estimation functions ... structure in complex systems, but difficulties in estimating these quantities has traditionally made these techniques ... making modern stateoftheart entropy estimation methods accessible in a single easy ... that numpy/scipy be installed. It includes estimators for entropy, mutual information, and conditional mutual information...

copent
 Referenced in 1 article
[sw33918]
 package copent: Estimating Copula Entropy. The nonparametric method for estimating copula entropy is implemented ... empirical copula by rank statistic and estimating copula entropy with kNearestNeighbour method. Copula ... equivalent to mutual information. Estimating copula entropy can be applied to many cases, including ... variable selection and causal discovery (by estimating transfer entropy). Please refer...

pcme
 Referenced in 2 articles
[sw32705]
 packagepcme: A package for maximum entropy estimation of periodically correlated processes...

MeddeR
 Referenced in 1 article
[sw27875]
 MeddeR: Maximum Entropy Deregularized Density Estimation in R. QuasiConcave Density Estimation: Maximum likelihood estimation ... entropy problem. Closely related maximum Renyi entropy estimators that impose weaker concavity restrictions...

MuTE
 Referenced in 6 articles
[sw19722]
 compare established and novel estimators of the multivariate transfer entropy. A challenge for physiologists...

vsgoftest
 Referenced in 1 article
[sw36707]
 provided to estimate differential Shannon entropy, i.e., estimate Shannon entropy of real random variables with...

ITE
 Referenced in 5 articles
[sw12811]
 that is capable of estimating many different variants of entropy, mutual information, divergence, association measures ... supports additionally (i) the combinations of the estimation techniques, (ii) the easy construction and embedding...

PETROPY
 Referenced in 6 articles
[sw19596]
 Systems: PETROPY. Permutation entropy provides a simple and robust method to estimate complexity of time ... values into account. Furthermore, permutation entropy can be used to determine embedding parameters or identify...

EntropyEstimation
 Referenced in 1 article
[sw24141]
 package EntropyEstimation: Estimation of Entropy and Related Quantities. Contains methods for the estimation of Shannon ... entropy, mutual information, KullbackLeibler divergence, and generalized Simpson’s indices. The estimators used have...

TRENTOOL
 Referenced in 5 articles
[sw19721]
 TRENTOOL (TRansfer ENtropy TOOLbox) is an open source GPLv3 Matlab® toolbox for the analysis ... friendly routines for the estimation and statistical testing of transfer entropy in time series data...

JIDT
 Referenced in 9 articles
[sw23550]
 entropy, etc; for both discrete and continuousvalued data; using various types of estimators...

TransferEntropy
 Referenced in 0 articles
[sw15134]
 TransferEntropy: The Transfer Entropy Package. Estimates the transfer entropy from one time series to another ... consists of continuous random variables. The transfer entropy is an extension of mutual information which ... Markov model. Two estimation methods are provided. The first calculates transfer entropy as the difference ... package references). The second estimation method estimate transfer entropy via the a generalized correlation...

LeakWatch
 Referenced in 3 articles
[sw30239]
 statistical techniques to provide estimates, with confidence intervals, for minentropy leakage (using ... demonstrate how LeakWatch can be used to estimate the size of information leaks...

IDTxl
 Referenced in 4 articles
[sw25603]
 functionality to estimate the following measures: 1) For network inference: multivariate transfer entropy (TE)/Granger ... partial information decomposition (PID); IDTxl implements estimators for discrete and continuous data with parallel computing...

parmigene
 Referenced in 0 articles
[sw27758]
 mutual information based on entropy estimates from knearest neighbors distances and algorithms...

infotheo
 Referenced in 0 articles
[sw36715]
 information theory based on several entropy estimators...

CEoptim
 Referenced in 2 articles
[sw19770]
 optimization, based on KullbackLeibler (or crossentropy) minimization. The method can be applied ... model fitting, combinatorial optimization, and maximum likelihood estimation...