• RMOP

  • Referenced in 1 article [sw08546]
  • Multi-Objective Evolutionary Algorithm (MOEA) coupled to Computational Fluid Dynamics (CFDs) software. For MOEA, Robust...
  • BioPhysConnectoR

  • Referenced in 4 articles [sw35194]
  • architectures to reduce turn-around times in evolutionary and biomolecular design studies. Our package ... above mentioned annotation of coevolution by reduced dynamics around the native state of proteins...
  • DARWIN

  • Referenced in 3 articles [sw02144]
  • potential solutions is subjected to an evolutionary process described by selection, reproduction and mutation processes ... that DARWIN is particularly useful when the dynamical model that creates the time series...
  • FAME

  • Referenced in 1 article [sw35158]
  • objective Evolutionary algorithm (FAME). It makes use of a smart operator controller that dynamically chooses...
  • WH-EA

  • Referenced in 2 articles [sw25946]
  • evolutionary algorithm for Wiener-Hammerstein system identification. Current methods to identify Wiener-Hammerstein systems using ... divided into obtaining front and back linear dynamics of the Wiener-Hammerstein model. Second ... This approach is based on a customized evolutionary algorithm (WH-EA) able to look...
  • MP-GeneticSynth

  • Referenced in 1 article [sw34305]
  • regulation mechanisms responsible for observed biological dynamics in terms of finite difference recurrent equations ... systems as a modeling framework, (ii) an evolutionary approach to discover flux regulation functions ... simultaneously all the reactions involved in complex dynamics. The tool is available as a plugin...
  • SLiM 2

  • Referenced in 2 articles [sw29497]
  • control over most aspects of the simulated evolutionary scenarios with a simple R-like scripting ... simulation construction, interactive runtime control, and dynamic visualization of simulation output, facilitating easy and fast...
  • Proofwatch

  • Referenced in 3 articles [sw28654]
  • focus the proof search using a dynamically updated notion of proof matching. The methods ... strategies invented for Mizar by evolutionary methods...
  • TreeJuxtaposer

  • Referenced in 5 articles [sw18623]
  • navigation that is well suited to the dynamic linking of side-by-side views while ... structural details of many phylogenetic, or evolutionary, trees. Our tool is also useful in many...
  • SiblingRivalry

  • Referenced in 1 article [sw29921]
  • program configuration chosen by our self-adapting evolutionary algorithm. When the faster configuration completes ... experimentation allows programs to adapt to changing dynamic environments and often outperform the original algorithm...
  • BAMMtools

  • Referenced in 0 articles [sw15314]
  • functions for analyzing and visualizing complex macroevolutionary dynamics on phylogenetic trees. It is a companion ... towards the analysis, interpretation, and visualization of evolutionary rates. Functionality includes visualization of rate shifts...
  • FASTAptamer

  • Referenced in 1 article [sw28242]
  • accelerates lead discovery and optimization and offers dynamic insight into selection processes. An underlying principle ... requisite numerical information by tracking the evolutionary trajectory of individual sequences in response to selection...
  • pyGDM

  • Referenced in 1 article [sw38667]
  • open source python toolkit for electro-dynamical simulations. It is written in pure python ... nanoparticle. pyGDM furthermore offers a toolkit for evolutionary optimization of nanoparticle geometries: The EO module...
  • ReDraw

  • Referenced in 1 article [sw36252]
  • application’s inception and in an evolutionary context as GUI changes keep pace with evolving ... metadata. Then, software repository mining, automated dynamic analysis, and deep convolutional neural networks are utilized...
  • NGS

  • Referenced in 1 article [sw29692]
  • genotyping method and apply to the evolutionary analysis of methicillin-resistant Staphylococcus aureus ... track the evolution and the transmission dynamic of bacterial pathogens. The computer programs...
  • BluePyOpt

  • Referenced in 0 articles [sw37639]
  • mathematical models take the form of complex dynamical systems. Parametrising such models to conform ... approximate solutions. Stochastic optimisation approaches, such as evolutionary algorithms, have been shown to be effective...
  • SWIMS

  • Referenced in 0 articles [sw29382]
  • software, which is the first non-linear dynamic, LCA-based optimisation tool for SWM that ... depth first search algorithm and a sequential evolutionary genetic algorithm is used to prioritise...
  • ALLD

  • Referenced in 2 articles [sw00030]
  • The ALLD simulation software implements a mesoscopic lattice...
  • ANSYS

  • Referenced in 666 articles [sw00044]
  • ANSYS offers a comprehensive software suite that spans...
  • BARON

  • Referenced in 327 articles [sw00066]
  • BARON is a computational system for solving nonconvex...