• ape

  • Referenced in 57 articles [sw04569]
  • character analyses, analyses of diversification and macroevolution, computing distances from allelic and nucleotide data, reading ... corresponding triangle method). Some functions call external applications (PhyML, Clustal, T-Coffee, Muscle) whose results...
  • AKIRA

  • Referenced in 10 articles [sw02968]
  • degrees and computational requests, that are able to act in an external world interacting with ... various aspects of the framework. Two soft computing technologies are provided: Fuzzy Logic and Fuzzy...
  • CrossGrid

  • Referenced in 12 articles [sw01979]
  • oriented towards computation- and data-intensive applications that need interaction with an external user...
  • emMAW

  • Referenced in 2 articles [sw29628]
  • emMAW: computing minimal absent words in external memory. Results ... present emMAW, the first external-memory algorithm for computing minimal absent words. A free open ... algorithm is made available. This allows for computation of minimal absent words on far bigger ... that our implementation, despite making use of external memory, is fast; indeed, even on relatively...
  • PHOENIX

  • Referenced in 3 articles [sw02606]
  • G.T.A. Huysmans, S. Poedts, E. Schwarz, J. Comput. Phys. 142 (1998) 271], incorporates purely toroidal ... toroidal and poloidal flow and external gravitational fields to compute the entire ideal or resistive...
  • CalculiX

  • Referenced in 18 articles [sw04199]
  • simple step reader is included. In addition external CAD interfaces like ... Unix platforms like Linux and Irix computers but also on MS-Windows. The CalculiX package...
  • pyMOR

  • Referenced in 15 articles [sw12978]
  • abstract interfaces for seamless integration with external high-dimensional PDE solvers. Moreover, pure Python implementations ... finite volume discretizations using the NumPy/SciPy scientific computing stack are provided for getting started quickly...
  • ConfiChair

  • Referenced in 7 articles [sw13266]
  • Cloud computing means entrusting data to information systems that are managed by external parties ... still allowing it to perform data-dependent computations. The technique is based on key translations...
  • URDME

  • Referenced in 25 articles [sw10400]
  • mature geometry and mesh handling external software (Comsol Multiphysics) provides for a stable and interactive ... written in a low-level language for computational efficiency. The connection to the geometry handling...
  • Society Visualiser

  • Referenced in 10 articles [sw20845]
  • meaningful semantics. We present a theoretical and computational framework being developed for the executable specification ... open agent societies. We adopt an external perspective and view societies as instances of normative...
  • SUPG

  • Referenced in 30 articles [sw08373]
  • surrounding liquid under the influence of an external electric field. This electrochemical transport process ... finite element method for the computations. Without proper numerical stabilization, computation of coupled fluid mechanics...
  • Package-X

  • Referenced in 12 articles [sw18225]
  • spacetime dimensions is described. Package-X computes arbitrarily high rank tensor integrals with ... kinematic configuration involving real-valued external invariants and internal masses. Output expressions can be readily ... friendliness. Also included is a routine to compute traces of products of Dirac matrices...
  • Gstat

  • Referenced in 20 articles [sw04488]
  • Gstat is an open source (GPL) computer code for multivariable geostatistical modelling, prediction and simulation ... functions specified (being coordinates, or so-called external drift variables). Simplifications of this model include...
  • ParaXpress

  • Referenced in 4 articles [sw15160]
  • external parallelization by UG against each other. We provide computational experiments to address this question...
  • CEDRE

  • Referenced in 10 articles [sw08577]
  • physics, which are coupled together for the computations. Here, we briefly present the solvers: reactive ... energetics, such as mechanics, by means of external couplings, using in particular the in-house ... performance cannot be considered independently from the computing code. The organization of development...
  • SCALEA

  • Referenced in 16 articles [sw02477]
  • mixed parallel/distributed programs. It computes a variety of performance metrics based on a novel overhead ... program directives. SCALEA can be interfaced by external tools through the provision of a full ... arbitrary code regions, threads, processes, and computational nodes for single- and multi-experiments...
  • elsA

  • Referenced in 35 articles [sw07602]
  • simulation platform dealing with internal and external aerodynamics from the low subsonic to the high ... with implicit LU schemes. For time accurate computations, the implicit dual time stepping method...
  • HepML

  • Referenced in 3 articles [sw09548]
  • HepML block in computer memory. The library is an API for external software. For example...
  • libhepml

  • Referenced in 3 articles [sw10326]
  • HepML block in computer memory. The library is an API for external software. For example...
  • Automata

  • Referenced in 2 articles [sw19148]
  • package. Many of the computationally critical algorithms are also implemented externally in a C++ library...