• AFNI

• Referenced in 25 articles [sw09076]
• three-dimensional human brain functional magnetic resonance imaging (FMRI) results is described. The software ... anatomical landmarks allows transformation of anatomical and functional scans into stereotaxic (Talairach–Tournoux) coordinates...

• AnalyzeFMRI

• Referenced in 12 articles [sw19796]
• package. For statistical analysis of functional Magnetic Resonance Imaging (fMRI) data sets, we propose...

• tractor.base

• Referenced in 3 articles [sw24708]
• tractor.base: Read, Manipulate and Visualise Magnetic Resonance Images. Functions for working with magnetic resonance images...

• SimTB

• Referenced in 4 articles [sw15243]
• MATLAB toolbox designed to simulate functional magnetic resonance imaging (fMRI) datasets under a model...

• DPARSF

• Referenced in 3 articles [sw07377]
• resting-state fMRI. Resting-state functional magnetic resonance imaging (fMRI) has attracted more and more ... invasiveness in exploration of the intrinsic functional architecture of the human brain. However, user-friendly...

• ER-fMRI

• Referenced in 2 articles [sw25579]
• MATLAB. Designs for event-related functional magnetic resonance imaging (ER-fMRI) that help to efficiently...

• CONN

• Referenced in 3 articles [sw26510]
• level estimation of multiple standard functional connectivity magnetic resonance imaging (fcMRI) measures, and second-level ... region of interest (ROI)-to-ROI functional correlations, as well as semipartial correlation and bivariate/multivariate...

• aws4SPM

• Referenced in 1 article [sw04035]
• popular software tools for analyzing functional Magnetic Resonance Imaging data is SPM by the Functional...

• RFASTfMRI

• Referenced in 1 article [sw35466]
• RFASTfMRI: Functional Magnetic Resonance Imaging is a noninvasive tool used to study brain function. Detecting...

• BASCO

• Referenced in 1 article [sw26514]
• functional connectivity in event-related functional magnetic resonance imaging (fMRI) data. Connectivity analyses extend ... explored. BASCO supports seed-based functional connectivity as well as brain network analyses. Although there...

• BSMac

• Referenced in 1 article [sw38613]
• toolbox for the analysis of functional magnetic resonance imaging (fMRI) data, called the Bayesian Spatial ... levels as well as task-related functional connectivity (FC) analyses using a flexible Bayesian modeling...

• fabisearch

• Referenced in 1 article [sw38226]
• functional connectivity networks for functional magnetic resonance imaging (fMRI) data. FaBiSearch uses non-negative matrix ... time series, net.3dplot(), for plotting the estimated functional connectivity networks, and opt.rank(), for finding...

• pyfMRIqc

• Referenced in 1 article [sw36094]
• checking the quality of raw functional magnetic resonance imaging (fMRI) data. pyfMRIqc produces a range...

• AnalyzIR

• Referenced in 1 article [sw31477]
• alternative to methods such as functional magnetic resonance imaging for studies in pediatric and special...

• QUEST

• Referenced in 1 article [sw18513]
• analysis of resting state functional magnetic resonance imaging data that allowed us to create...

• POBE

• Referenced in 1 article [sw24493]
• Subject Blocked fMRI Experiments. For functional magnetic resonance imaging (fMRI) studies, researchers can use multi...

• BrainSuite

• Referenced in 5 articles [sw21296]
• processing of magnetic resonance images (MRI) of the human brain. The major functionality of these...

• MFBOX

• Referenced in 1 article [sw09960]
• lies on the analysis of functional Nuclear Magnetic Resonance Imaging (fMRI) data sets with various...

• BRAPH

• Referenced in 1 article [sw26515]
• brain networks derived from structural magnetic resonance imaging (MRI), functional MRI (fMRI), positron emission tomography...

• dti

• Referenced in 7 articles [sw06588]
• Diffusion Weighted Imaging (DWI) is a Magnetic Resonance Imaging modality, that measures diffusion of water ... human brain. The package contains R-functions to process diffusion-weighted data. The functionality includes...