• TRANSWESD

  • Referenced in 1 article [sw17199]
  • removal of false positive edges. Transitive reduction is one approach for eliminating edges reflecting indirect ... reconstructing cyclic interaction graphs with true redundant structures is problematic. Results: We present TRANSWESD ... elaborated variant of TRANSitive reduction for WEighted Signed Digraphs that overcomes conceptual problems of existing ... statistical approaches for generating high-quality perturbation graphs from systematic perturbation experiments...
  • slingshot

  • Referenced in 5 articles [sw36159]
  • component in an analysis pipeline after dimensionality reduction and clustering. It is flexible enough ... incorporation of prior knowledge through supervised graph construction...
  • Eigen-GNN

  • Referenced in 2 articles [sw38084]
  • graph structures with GNNs by treating GNNs as a type of dimensionality reduction and expanding ... initial dimensionality reduction bases. Without needing to increase depths, Eigen-GNN possesses more flexibilities ... initial bases contain both node features and graph structures. We present extensive experimental results...
  • Intrinsic-Dimension

  • Referenced in 5 articles [sw39926]
  • Carnevale ”Accurate estimation of intrinsic dimension using graph distances: unraveling the geometric complexity of datasets ... This observation justifies the use of dimensionality reduction approaches to model complex systems and motivates ... geodesics with minimum distance paths on a graph, we analyze the distribution of pairwise distances...
  • MathCheck

  • Referenced in 13 articles [sw13642]
  • long-standing open mathematical conjectures from graph theory regarding properties of hypercubes: the first conjecture ... detailed performance analysis and show an exponential reduction in search space...
  • FiniteFlow

  • Referenced in 7 articles [sw41195]
  • framework employs computational graphs, known as dataflow graphs, to combine basic building blocks into complex ... multi-loop scattering amplitudes, including the reduction via integration-by-parts identities to master integrals...
  • Geoxp

  • Referenced in 7 articles [sw08289]
  • selection of a portion of the graph results in the automatic highlighting of the corresponding ... data, GeoXp includes some dimension reduction techniques such...
  • Spin-to-Grape

  • Referenced in 6 articles [sw07515]
  • group-theoretic package Gap and its graph-theoretic add on, Grape. Through studying these examples ... Finally we discuss ways in which symmetry reduction techniques incorporated within Spin, e.g., the SymmSpin...
  • InfoMod

  • Referenced in 1 article [sw21234]
  • classes in terms of certain infinite planar graphs (dessins) called c{c}arks. InfoMod illustrates ... various aspects of these forms, i.e. Gauss’ reduction algorithm, the representation problem of forms, ambiguous...
  • GraphSAINT

  • Referenced in 1 article [sw37758]
  • GraphSAINT constructs minibatches by sampling the training graph, rather than the nodes or edges across ... eliminate bias, and sampling algorithms for variance reduction. Importantly, we can decouple the sampling from ... extend GraphSAINT with many architecture variants (e.g., graph attention, jumping connection). GraphSAINT demonstrates superior performance...
  • Rainbowfish

  • Referenced in 2 articles [sw33131]
  • uses BOSS to represent the de Bruijn graph, but decomposes the color sets based ... sets, which can lead to a significant reduction in the space required to store...
  • EigenCFA

  • Referenced in 3 articles [sw14136]
  • from linear-algebra operations. Central to this reduction were “abstract” Church encodings, and encodings ... critical accelerants. Because control-flow graphs are sparse in practice (up to 96% empty...
  • CONN

  • Referenced in 3 articles [sw26510]
  • global signal regression, the CompCor noise reduction method allows for interpretation of anticorrelations as there ... bivariate/multivariate regression analysis for multiple ROI sources, graph theoretical analysis, and novel voxel-to-voxel...
  • multiflexxlib

  • Referenced in 2 articles [sw26145]
  • MultiFLEXX. A Python software package for data reduction and visualization of continuous angle multiple energy ... interfaces for versatile tweaking of graphing parameters, facilitating generation of production-quality graphs...
  • HyperTools

  • Referenced in 2 articles [sw18876]
  • time as (x,y) coordinates on a graph), it is not always obvious ... primary approach is to use dimensionality reduction techniques (Pearson, 1901; Tipping & Bishop, 1999) to embed...
  • SASEPA

  • Referenced in 2 articles [sw02446]
  • algorithm is total processing time reduction; such are the requirements when we deal with automated ... also evaluated over randomly generated task graphs...
  • Merlin

  • Referenced in 5 articles [sw23076]
  • resulting system of probabilistic constraints using factor graphs, which are a well-known structure ... positives being removed; this constitutes a 15% reduction in the CAT.NET false positive rate...
  • solverALL

  • Referenced in 2 articles [sw33799]
  • clusters is a standard optimization task in graph-based data clustering. Here, complementing classic work ... deletions. Nevertheless, we develop several effective data reduction and pruning rules, resulting in a competitive...
  • SurvivalVolume

  • Referenced in 1 article [sw29176]
  • disease (increasing volume), stable disease and regression (reduction in volume) under therapy are important measures ... presenting this data involve 3 unconnected graphs: line graphs of each individual, average volume...
  • PyKale

  • Referenced in 1 article [sw39156]
  • library for knowledge-aware machine learning on graphs, images, texts, and videos to enable ... adaptation) with latest deep learning and dimensionality reduction models. We build PyKale on PyTorch ... interdisciplinary nature via examples in bioinformatics, knowledge graph, image/video recognition, and medical imaging...