• AdMit

  • Referenced in 8 articles [sw09498]
  • density of interest. Then, importance sampling or the independence chain Metropolis-Hastings algorithm is used ... density, using the fitted mixture as the importance or candidate density. The estimation procedure ... consuming and difficult task of tuning a sampling algorithm. The relevance of the package...
  • laGP

  • Referenced in 21 articles [sw14043]
  • finding small local designs for prediction (independently) at particular inputs. OpenMP and SNOW parallelization ... sample testing set; GPU acceleration is also supported for an important subroutine. OpenMP...
  • Memtype-2L

  • Referenced in 39 articles [sw16472]
  • type it belongs to? These questions are important because they are closely relevant ... evolution information through representing the protein samples with the Pse-PSSM (Pseudo Position-Specific Score ... both the jackknife test and the independent dataset test are quite high, indicating that MemType...
  • iMethyl-PseAAC

  • Referenced in 21 articles [sw22443]
  • which site cannot? This is the first important problem for understanding the methylation mechanism ... PseAAC. In the prediction system, a peptide sample was formulated by a 346-dimensional vector ... observed by the rigorous jackknife test and independent dataset test that iMethyl-PseAAC was superior...
  • CALREL

  • Referenced in 3 articles [sw12598]
  • limit-state surfaces; and (6) Importance sampling and Monte Carlo simulation for components and general ... large library of probability distributions for independent as well as dependent variables. Additional distributions...
  • colcor

  • Referenced in 5 articles [sw12289]
  • rows correspond to genes and columns to samples. We commonly calculate test statistics ... genes. The empirical cdf of Z is important for FDR methods, since its mean ... that if the columns of X are independent, the variance of the empirical ... correlation. We show Fisher’s transformation for sample correlations is still normalizing and variance stabilizing...
  • ROCKET

  • Referenced in 11 articles [sw30016]
  • relationships between random variables is of fundamental importance in high-dimensional statistics, with numerous applications ... results. ROCKET requires the same number of samples that are known to be necessary ... correlation matrix, which is of independent interest. Empirically, ROCKET outperforms the nonparanormal and Gaussian models...
  • ROAST

  • Referenced in 7 articles [sw17318]
  • unrealistically assume independence of genes, while those that rely on permutation of sample are suitable ... number of rotations does not depend on sample size, ROAST gives useful results even ... also incorporate array weights and correlated samples. ROAST can be tuned for situations in which ... also be weighted to allow for prior importance. The power and size of the ROAST...
  • PenPC

  • Referenced in 4 articles [sw25384]
  • directed acyclic graph (DAG) is of great importance for understanding the underlying DAG and causal ... skeleton by evaluating a set of conditional independence hypotheses. For high-dimensional problems where ... polynomial or exponential scale of sample size n, we study the asymptotic property of 𝖯𝖾𝗇𝖯𝖢...
  • vegetarian

  • Referenced in 2 articles [sw24142]
  • advantage of providing diversity numbers equivalents, independent alpha and beta diversities, and the ability ... continuous measure of the importance of rare species in the metrics. The functions provided ... datasets with many samples (sites, plots), sim.table creates tables of all pairwise comparisons possible...
  • figureone

  • Referenced in 1 article [sw32410]
  • point and click open source and platform-independent software tool that aids the graphical representation ... illustration the important features of the data. Examples include sample collections, the time of each...
  • CosmoPMC

  • Referenced in 1 article [sw24738]
  • modules can be added easily. The importance-sampling algorithm is written in C, and fully ... overhead, the wall-clock time required for sampling scales approximately with the number of CPUs ... sampling engine is implemented in the library pmclib, and can be used independently...
  • LabFit

  • Referenced in 1 article [sw06003]
  • similar data (grouped and ungrouped dataset, two samples); 2) Treat non-similar data; 3) Calculate ... eight independent variables); 5) Plot graphs (2D and 3D) (normal, parametric, imported dataset, contour...
  • polysat

  • Referenced in 1 article [sw15951]
  • known in partially heterozygous genotypes. It can import and export data in ABI ’GeneMapper’, ’Structure ... user in estimating the ploidy of samples, and it can estimate allele frequencies in populations ... primers amplifies alleles from two or more independently segregating isoloci...
  • RobPer

  • Referenced in 1 article [sw24102]
  • important task in astroparticle physics is the detection of periodicities in irregularly sampled time series ... classic Fourier periodogram cannot deal with irregular sampling and with the measurement accuracies that ... justified in case of least squares regression, independent periodogram bars and a null hypothesis allowing...
  • WINPEPI

  • Referenced in 1 article [sw24901]
  • comparisons of two independent groups or samples; PAIRSetc, for use in comparisons of paired ... epidemiological studies, and with respect to important epidemiological concepts. It can also be used...
  • CoCoA

  • Referenced in 634 articles [sw00143]
  • CoCoA is a system for Computations in Commutative...
  • Cuba

  • Referenced in 60 articles [sw00173]
  • Cuba -- a library for multidimensional numerical integration. The...
  • FEXACT

  • Referenced in 14 articles [sw00281]
  • Algorithm 643 FEXACT: The computer code for Mehta...
  • Macaulay2

  • Referenced in 1721 articles [sw00537]
  • Macaulay2 is a software system devoted to supporting...