
AdMit
 Referenced in 8 articles
[sw09498]
 density of interest. Then, importance sampling or the independence chain MetropolisHastings algorithm is used ... density, using the fitted mixture as the importance or candidate density. The estimation procedure ... consuming and difficult task of tuning a sampling algorithm. The relevance of the package...

laGP
 Referenced in 21 articles
[sw14043]
 finding small local designs for prediction (independently) at particular inputs. OpenMP and SNOW parallelization ... sample testing set; GPU acceleration is also supported for an important subroutine. OpenMP...

Memtype2L
 Referenced in 39 articles
[sw16472]
 type it belongs to? These questions are important because they are closely relevant ... evolution information through representing the protein samples with the PsePSSM (Pseudo PositionSpecific Score ... both the jackknife test and the independent dataset test are quite high, indicating that MemType...

iMethylPseAAC
 Referenced in 21 articles
[sw22443]
 which site cannot? This is the first important problem for understanding the methylation mechanism ... PseAAC. In the prediction system, a peptide sample was formulated by a 346dimensional vector ... observed by the rigorous jackknife test and independent dataset test that iMethylPseAAC was superior...

CALREL
 Referenced in 3 articles
[sw12598]
 limitstate surfaces; and (6) Importance sampling and Monte Carlo simulation for components and general ... large library of probability distributions for independent as well as dependent variables. Additional distributions...

colcor
 Referenced in 5 articles
[sw12289]
 rows correspond to genes and columns to samples. We commonly calculate test statistics ... genes. The empirical cdf of Z is important for FDR methods, since its mean ... that if the columns of X are independent, the variance of the empirical ... correlation. We show Fisher’s transformation for sample correlations is still normalizing and variance stabilizing...

ROCKET
 Referenced in 11 articles
[sw30016]
 relationships between random variables is of fundamental importance in highdimensional statistics, with numerous applications ... results. ROCKET requires the same number of samples that are known to be necessary ... correlation matrix, which is of independent interest. Empirically, ROCKET outperforms the nonparanormal and Gaussian models...

ROAST
 Referenced in 7 articles
[sw17318]
 unrealistically assume independence of genes, while those that rely on permutation of sample are suitable ... number of rotations does not depend on sample size, ROAST gives useful results even ... also incorporate array weights and correlated samples. ROAST can be tuned for situations in which ... also be weighted to allow for prior importance. The power and size of the ROAST...

PenPC
 Referenced in 4 articles
[sw25384]
 directed acyclic graph (DAG) is of great importance for understanding the underlying DAG and causal ... skeleton by evaluating a set of conditional independence hypotheses. For highdimensional problems where ... polynomial or exponential scale of sample size n, we study the asymptotic property of 𝖯𝖾𝗇𝖯𝖢...

vegetarian
 Referenced in 2 articles
[sw24142]
 advantage of providing diversity numbers equivalents, independent alpha and beta diversities, and the ability ... continuous measure of the importance of rare species in the metrics. The functions provided ... datasets with many samples (sites, plots), sim.table creates tables of all pairwise comparisons possible...

figureone
 Referenced in 1 article
[sw32410]
 point and click open source and platformindependent software tool that aids the graphical representation ... illustration the important features of the data. Examples include sample collections, the time of each...

CosmoPMC
 Referenced in 1 article
[sw24738]
 modules can be added easily. The importancesampling algorithm is written in C, and fully ... overhead, the wallclock time required for sampling scales approximately with the number of CPUs ... sampling engine is implemented in the library pmclib, and can be used independently...

LabFit
 Referenced in 1 article
[sw06003]
 similar data (grouped and ungrouped dataset, two samples); 2) Treat nonsimilar data; 3) Calculate ... eight independent variables); 5) Plot graphs (2D and 3D) (normal, parametric, imported dataset, contour...

polysat
 Referenced in 1 article
[sw15951]
 known in partially heterozygous genotypes. It can import and export data in ABI ’GeneMapper’, ’Structure ... user in estimating the ploidy of samples, and it can estimate allele frequencies in populations ... primers amplifies alleles from two or more independently segregating isoloci...

RobPer
 Referenced in 1 article
[sw24102]
 important task in astroparticle physics is the detection of periodicities in irregularly sampled time series ... classic Fourier periodogram cannot deal with irregular sampling and with the measurement accuracies that ... justified in case of least squares regression, independent periodogram bars and a null hypothesis allowing...

WINPEPI
 Referenced in 1 article
[sw24901]
 comparisons of two independent groups or samples; PAIRSetc, for use in comparisons of paired ... epidemiological studies, and with respect to important epidemiological concepts. It can also be used...

CoCoA
 Referenced in 634 articles
[sw00143]
 CoCoA is a system for Computations in Commutative...

Cuba
 Referenced in 60 articles
[sw00173]
 Cuba  a library for multidimensional numerical integration. The...

FEXACT
 Referenced in 14 articles
[sw00281]
 Algorithm 643 FEXACT: The computer code for Mehta...

Macaulay2
 Referenced in 1721 articles
[sw00537]
 Macaulay2 is a software system devoted to supporting...