• Knot Atlas

  • Referenced in 96 articles [sw11550]
  • knot atlas (collection of maps), theory database, knowledge base, and ”a home for some computer...
  • RegulonDB

  • Referenced in 53 articles [sw25948]
  • regulondb.ccg.unam.mx/) is the primary reference database offering curated knowledge of the transcriptional regulatory network ... currently the best-known electronically encoded database of the genetic regulatory network of any free...
  • SMOTEBoost

  • Referenced in 35 articles [sw12571]
  • Class in Boosting, Journal of Knowledge Discovery in Databases: PKDD, 2003. The current implementation...
  • Freebase

  • Referenced in 23 articles [sw27335]
  • Freebase: A shared database of structured general human knowledge. Freebase is a practical, scalable, graph ... shaped database of structured general human knowledge, inspired by Semantic Web research and collaborative data...
  • KEGG

  • Referenced in 281 articles [sw13866]
  • Genes and Genomes. KEGG is a database resource for understanding high-level functions and utilities ... chemical information) that are integrated with the knowledge on molecular wiring diagrams of interaction, reaction...
  • PYTHIA

  • Referenced in 29 articles [sw00747]
  • system which combines a general knowledge discovery in databases (KDD) methodology and recommender system technologies...
  • R3P-Loc

  • Referenced in 2 articles [sw22444]
  • biological functions. Computational methods based on knowledge databases (such as gene ontology annotation (GOA) database ... knowledge-based methods are that (1) knowledge databases typically have enormous size and are growing ... exponentially, (2) knowledge databases contain redundant information, and (3) the number of extracted features from ... knowledge databases is much larger than the number of data samples with ground-truth labels...
  • FRIL

  • Referenced in 44 articles [sw18490]
  • Describes the application to general areas of knowledge engineering including expert and decision-support systems ... case-based reasoning, fuzzy control and databases. An accompanying disk for Macintosh...
  • DBLEARN

  • Referenced in 4 articles [sw02883]
  • heuristic for evaluating databases for knowledge discovery with DBLEARN We propose a heuristic method ... choosing databases for attempting knowledge discovery. The DBLEARN knowledge-discovery program uses an attribute-oriented ... discover potentially significant relations in a database. A concept forest defines the possible generalizations that...
  • UniProt

  • Referenced in 136 articles [sw21320]
  • sequence that already exists in the database with the majority of sequences coming from genome ... UniProt to represent the relative amount of knowledge known about each protein. These scores will...
  • IAM

  • Referenced in 12 articles [sw08585]
  • that the database would be particularly useful for recognition tasks where linguistic knowledge beyond ... because this knowledge can be automatically derived from the underlying corpus. The database also includes...
  • dmGWAS

  • Referenced in 3 articles [sw29291]
  • association data with that from prior-knowledge databases and proteome studies has recently gained attention...
  • TRANSPATH

  • Referenced in 7 articles [sw08272]
  • pathways. As one of the earliest pathway databases ever created, it has grown since ... integral part of the BIOBASE Knowledge Library (BKL)/ PROTEOME Database, but can also be obtained...
  • Hum-mPLoc

  • Referenced in 26 articles [sw26862]
  • than 50 amino acids) in the same database is 14,370, meaning ... entries for which no knowledge is available about their subcellular locations. Although ... human protein entries in the Swiss-Prot database that do not have subcellular location annotations...
  • Reactome

  • Referenced in 24 articles [sw14952]
  • open-source, curated and peer reviewed pathway database. Our goal is to provide intuitive bioinformatics ... visualization, interpretation and analysis of pathway knowledge to support basic research, genome analysis, modeling, systems...
  • AMYPdb

  • Referenced in 2 articles [sw35341]
  • therefore created a free online knowledge database (AMYPdb) dedicated to amyloid precursor proteins...
  • DeepLoc

  • Referenced in 2 articles [sw42629]
  • rely on annotation of homologues from knowledge databases. For novel proteins where no annotated homologues...
  • NOEMON

  • Referenced in 11 articles [sw02384]
  • crucial for effective knowledge discovery on a dataset. For large databases, common in data mining ... from those measurements and accommodated in a knowledge base. The suggestion on the most appropriate...
  • Casper*

  • Referenced in 18 articles [sw41703]
  • based database server to deal with snapshot and continuous queries based on the knowledge...
  • Euk-mPLoc

  • Referenced in 42 articles [sw26860]
  • Meanwhile, according to the same Swiss-Prot database, the number of total eukaryotic protein entries ... entries for which no knowledge is available about their subcellular locations. Although ... eukaryotic protein entries in the Swiss-Prot database that do not have subcellular location annotations...