• GEPSO

  • Referenced in 1 article [sw37529]
  • NPSO), Deterministic PSO (DPSO), and Line Search-Based Derivative-Free PSO (LS-DF-PSO) approaches ... showed that the GEPSO outperformed the compared methods in terms of mean and standard deviation...
  • LMBOPT

  • Referenced in 2 articles [sw42606]
  • LMBOPT: a limited memory method for bound-constrained optimization. Recently, Neumaier and Azmi gave ... active set strategy with a gradient-free line search CLS along a piecewise linear search...
  • MEGA6

  • Referenced in 3 articles [sw16250]
  • timetrees, as it implements the RelTime method for estimating divergence times for all branching points ... This version also contains enhanced algorithms to search for the optimal trees under evolutionary criteria ... command-line versions of MEGA6 can be downloaded from www.megasoftware.net free of charge...
  • TESTINT

  • Referenced in 1 article [sw36991]
  • Derivative-Free Library - TESTINT: A collection of 240 inequality constrained plus 61 bound constrained test ... based on primitive directions and nonmonotone line searches for black-box optimization problems with integer ... specific search directions (so called primitive directions) and a suitably developed nonmonotone line search, thus ... problems. We show the effectiveness of the method when compared to other state...
  • SIMPLE

  • Referenced in 2 articles [sw22789]
  • IMage Processing Linux Engine provides data analysis methods for single-particle cryo-electron microscopy (cryo ... optimization with the use of Fourier common lines. The advance that enables ab initio reconstruction ... orientation search - a new concept in common lines-based strategies. Bijective orientation search divides ... plane alignment is approximated using reference-free 2D rotational alignment. The subsequent common lines-based...
  • ddepn

  • Referenced in 1 article [sw14723]
  • pathways that influence tumour development. Cancer cell lines can be used as model systems ... approach by two novel methods: a Markov Chain Monte Carlo method for sampling network structures ... that learns signalling networks with the scale-free property. Conclusions: The package ’ddepn’ is freely ... using two different sampling based network structure search algorithms...
  • ADOL-C

  • Referenced in 257 articles [sw00019]
  • ADOL-C: Automatic Differentiation of C/C++. We present...
  • ANSYS

  • Referenced in 713 articles [sw00044]
  • ANSYS offers a comprehensive software suite that spans...
  • ATLAS

  • Referenced in 199 articles [sw00056]
  • This paper describes the Automatically Tuned Linear Algebra...
  • BARON

  • Referenced in 361 articles [sw00066]
  • BARON is a computational system for solving nonconvex...
  • cdd

  • Referenced in 119 articles [sw00114]
  • The program cdd+ (cdd, respectively) is a C...
  • CGAL

  • Referenced in 402 articles [sw00118]
  • The goal of the CGAL Open Source Project...
  • CoCoA

  • Referenced in 659 articles [sw00143]
  • CoCoA is a system for Computations in Commutative...
  • complib

  • Referenced in 35 articles [sw00149]
  • COMPlib: COnstraint matrix-optimization problem library–a collection...
  • CSDP

  • Referenced in 206 articles [sw00169]
  • CSDP, A C Library for Semidefinite Programming. This...
  • CUTE

  • Referenced in 66 articles [sw00177]
  • CUTE: a concolic unit testing engine for C...
  • GAP

  • Referenced in 3221 articles [sw00320]
  • GAP is a system for computational discrete algebra...
  • gmp

  • Referenced in 289 articles [sw00363]
  • GMP is a free library for arbitrary precision...
  • HSL

  • Referenced in 284 articles [sw00418]
  • HSL (formerly the Harwell Subroutine Library) is a...