
GEPSO
 Referenced in 1 article
[sw37529]
 NPSO), Deterministic PSO (DPSO), and Line SearchBased DerivativeFree PSO (LSDFPSO) approaches ... showed that the GEPSO outperformed the compared methods in terms of mean and standard deviation...

LMBOPT
 Referenced in 2 articles
[sw42606]
 LMBOPT: a limited memory method for boundconstrained optimization. Recently, Neumaier and Azmi gave ... active set strategy with a gradientfree line search CLS along a piecewise linear search...

MEGA6
 Referenced in 3 articles
[sw16250]
 timetrees, as it implements the RelTime method for estimating divergence times for all branching points ... This version also contains enhanced algorithms to search for the optimal trees under evolutionary criteria ... commandline versions of MEGA6 can be downloaded from www.megasoftware.net free of charge...

TESTINT
 Referenced in 1 article
[sw36991]
 DerivativeFree Library  TESTINT: A collection of 240 inequality constrained plus 61 bound constrained test ... based on primitive directions and nonmonotone line searches for blackbox optimization problems with integer ... specific search directions (so called primitive directions) and a suitably developed nonmonotone line search, thus ... problems. We show the effectiveness of the method when compared to other state...

SIMPLE
 Referenced in 2 articles
[sw22789]
 IMage Processing Linux Engine provides data analysis methods for singleparticle cryoelectron microscopy (cryo ... optimization with the use of Fourier common lines. The advance that enables ab initio reconstruction ... orientation search  a new concept in common linesbased strategies. Bijective orientation search divides ... plane alignment is approximated using referencefree 2D rotational alignment. The subsequent common linesbased...

ddepn
 Referenced in 1 article
[sw14723]
 pathways that influence tumour development. Cancer cell lines can be used as model systems ... approach by two novel methods: a Markov Chain Monte Carlo method for sampling network structures ... that learns signalling networks with the scalefree property. Conclusions: The package ’ddepn’ is freely ... using two different sampling based network structure search algorithms...

ADOLC
 Referenced in 257 articles
[sw00019]
 ADOLC: Automatic Differentiation of C/C++. We present...

ANSYS
 Referenced in 713 articles
[sw00044]
 ANSYS offers a comprehensive software suite that spans...

ATLAS
 Referenced in 199 articles
[sw00056]
 This paper describes the Automatically Tuned Linear Algebra...

BARON
 Referenced in 361 articles
[sw00066]
 BARON is a computational system for solving nonconvex...

cdd
 Referenced in 119 articles
[sw00114]
 The program cdd+ (cdd, respectively) is a C...

CGAL
 Referenced in 402 articles
[sw00118]
 The goal of the CGAL Open Source Project...

CoCoA
 Referenced in 659 articles
[sw00143]
 CoCoA is a system for Computations in Commutative...

complib
 Referenced in 35 articles
[sw00149]
 COMPlib: COnstraint matrixoptimization problem library–a collection...

CSDP
 Referenced in 206 articles
[sw00169]
 CSDP, A C Library for Semidefinite Programming. This...

CUTE
 Referenced in 66 articles
[sw00177]
 CUTE: a concolic unit testing engine for C...

GAP
 Referenced in 3221 articles
[sw00320]
 GAP is a system for computational discrete algebra...

gmp
 Referenced in 289 articles
[sw00363]
 GMP is a free library for arbitrary precision...

HSL
 Referenced in 284 articles
[sw00418]
 HSL (formerly the Harwell Subroutine Library) is a...