• Mathematica

  • Referenced in 6355 articles [sw00554]
  • Almost any workflow involves computing results, and that...
  • Qhull

  • Referenced in 320 articles [sw04419]
  • The convex hull of a point set P...
  • PHiPAC

  • Referenced in 53 articles [sw04898]
  • The PHiPAC (Portable High Performance ANSI C) Page...
  • PHYLIP

  • Referenced in 102 articles [sw07694]
  • PHYLIP is a free package of programs for...
  • RAxML

  • Referenced in 44 articles [sw07716]
  • Parallel inference of a 10.000-taxon phylogeny with...
  • PAUP*

  • Referenced in 57 articles [sw07834]
  • PAUP*: phylogenetic analysis under parsimony. PAUP* version 4.0...
  • Notung

  • Referenced in 13 articles [sw08917]
  • NOTUNG: A Program for Dating Gene Duplications and...
  • bioperl

  • Referenced in 23 articles [sw10579]
  • The bioperl toolkit: Perl modules for the life...
  • PAML

  • Referenced in 43 articles [sw10916]
  • Phylogenetic Analysis by Maximum Likelihood (PAML). PAML is...
  • ClustalW

  • Referenced in 138 articles [sw12016]
  • CLUSTAL W: improving the sensitivity of progressive multiple...
  • GIGA

  • Referenced in 4 articles [sw29606]
  • GIGA: a simple, efficient algorithm for gene tree...
  • TreeFix

  • Referenced in 6 articles [sw29607]
  • TreeFix: statistically informed gene tree error correction using...