• LAPACK

  • Referenced in 1702 articles [sw00503]
  • LAPACK is written in Fortran 90 and provides...
  • Mathematica

  • Referenced in 6355 articles [sw00554]
  • Almost any workflow involves computing results, and that...
  • Matlab

  • Referenced in 13544 articles [sw00558]
  • MATLAB® is a high-level language and interactive...
  • R

  • Referenced in 9969 articles [sw00771]
  • R is a language and environment for statistical...
  • ScaLAPACK

  • Referenced in 418 articles [sw00830]
  • ScaLAPACK is an acronym for scalable linear algebra...
  • SNOPT

  • Referenced in 551 articles [sw02300]
  • SNOPT: An SQP algorithm for large-scale constrained...
  • MIRA

  • Referenced in 1 article [sw02392]
  • MIRA is a multi-pass DNA sequence data...
  • STAR

  • Referenced in 14 articles [sw02515]
  • STAR: ultrafast universal RNA-seq aligner. Motivation: Accurate...
  • CPLEX

  • Referenced in 2773 articles [sw04082]
  • IBM® ILOG® CPLEX® offers C, C++, Java, .NET...
  • Gurobi

  • Referenced in 690 articles [sw04105]
  • GUROBI OPTIMIZER: State of the Art Mathematical Programming...
  • Bioconductor

  • Referenced in 319 articles [sw04205]
  • Bioconductor provides tools for the analysis and comprehension...
  • ARPACK

  • Referenced in 842 articles [sw04218]
  • ARPACK is a collection of Fortran77 subroutines designed...
  • Mosek

  • Referenced in 493 articles [sw04618]
  • MOSEK is a tool for solving mathematical optimization...
  • NewtonLib

  • Referenced in 298 articles [sw04796]
  • Numerical Mathematics - NewtonLib. Software repository for Peter Deuflhards...
  • XPRESS

  • Referenced in 230 articles [sw04834]
  • FICO Xpress is the premier mathematical modeling and...
  • CHARMM

  • Referenced in 120 articles [sw05953]
  • CHARMM (Chemistry at HARvard Macromolecular Mechanics). CHARMM models...
  • GlobPlot

  • Referenced in 7 articles [sw06213]
  • GlobPlot: exploring protein sequences for globularity and disorder...
  • MPI

  • Referenced in 515 articles [sw06496]
  • Automatic differentiation through the use of hyper-dual...
  • Biopython

  • Referenced in 20 articles [sw07357]
  • Biopython: freely available Python tools for computational molecular...
  • GQTPAR

  • Referenced in 325 articles [sw07451]
  • Computing a trust region step We propose an...