
Stan
 Referenced in 192 articles
[sw10200]
 MCMC sampling (NUTS, HMC) and penalized maximum likelihood estimation with Optimization (BFGS). Stan is coded...

STABLE
 Referenced in 108 articles
[sw04843]
 stable random variates. It also performs maximum likelihood estimation of stable parameters and some exploratory ... work is described in the paper ”Maximum likelihood estimation of stable parameters”, J. P. Nolan...

MLwiN
 Referenced in 104 articles
[sw04837]
 fitting multilevel models. It uses both maximum likelihood estimation and Markov Chain Monte Carlo (MCMC...

VGAM
 Referenced in 94 articles
[sw04490]
 fits many models and distribution by maximum likelihood estimation (MLE) or penalized MLE. Also fits...

fastDNAml
 Referenced in 91 articles
[sw06651]
 fastDNAml is a program for estimating maximum likelihood phylogenetic trees from nucleotide sequences. Much...

rms
 Referenced in 90 articles
[sw04532]
 Regression Modeling Strategies , Regression modeling, testing, estimation, validation, graphics, prediction, and typesetting by storing enhanced ... rightcensored responses, and implements penalized maximum likelihood estimation for logistic and ordinary linear models...

bnlearn
 Referenced in 62 articles
[sw08265]
 well as support for parameter estimation (maximum likelihood and Bayesian) and inference, conditional probability queries...

RStan
 Referenced in 58 articles
[sw13990]
 this package to parse, compile, test, estimate, and analyze Stan models by accessing the header ... variational approximation, and (optionally penalized) maximum likelihood estimation via optimization. In all three cases, automatic...

RandomFields
 Referenced in 56 articles
[sw08188]
 value random fields; conditional simulation; kriging; maximum likelihood estimation...

AS 154
 Referenced in 52 articles
[sw14113]
 algorithm for exact maximum likelihood estimation of autoregressive moving average models by means of Kalman...

LogConcDEAD
 Referenced in 49 articles
[sw08080]
 Arbitrary Dimensions. Computes a logconcave (maximum likelihood) estimator for i.i.d. data in any number...

CDVine
 Referenced in 47 articles
[sw08161]
 estimated either sequentially or by joint maximum likelihood estimation. Sampling algorithms and plotting methods...

logcondens
 Referenced in 49 articles
[sw11215]
 logcondens: Estimate a LogConcave Probability Density from iid Observations. Given independent and identically distributed ... this package allows to compute the maximum likelihood estimator (MLE) of a density as well...

dlm
 Referenced in 28 articles
[sw04503]
 Likelihood Analysis of Dynamic Linear Models. Maximum likelihood, Kalman filtering and smoothing, and Bayesian analysis ... state space models, the Kalman filter for estimation and forecasting in dynamic ... linear models with known parameters, and maximum likelihood estimation. It also presents many specific dynamic ... parameters. It presents a discussion of maximum likelihood estimation and a much more elaborated...

VineCopula
 Referenced in 35 articles
[sw08160]
 estimated either sequentially or by joint maximum likelihood estimation. Sampling algorithms and plotting methods...

MIXOR
 Referenced in 26 articles
[sw08990]
 ordinal regression analysis. MIXOR provides maximum marginal likelihood estimates for mixedeffects ordinal probit, logistic ... dependent. The degree of dependency is jointly estimated with the usual model parameters, thus adjusting ... intercepts and slopes across time, and can estimate the degree to which these timerelated ... population of individuals. MIXOR uses marginal maximum likelihood estimation, utilizing a Fisherscoring solution...

vsn
 Referenced in 29 articles
[sw06105]
 uses a robust variant of the maximumlikelihood estimator for the stochastic model of microarray...

rstan
 Referenced in 28 articles
[sw16103]
 functions are provided to parse, compile, test, estimate, and analyze Stan models by accessing ... variational approximation, and (optionally penalized) maximum likelihood estimation via optimization. In all three cases, automatic...

Maxlik
 Referenced in 28 articles
[sw08900]
 Maxlik: a package for maximum likelihood estimation in R. This paper describes the package maxLik...

QUIC
 Referenced in 25 articles
[sw11795]
 estimation. The ℓ 1 regularized Gaussian maximum likelihood estimator (MLE) has been shown to have...