• stringgaussnet

  • Referenced in 0 articles [sw15372]
  • Gaussian Network Construction from Transcriptomic Analysis Results Integrating a Multilevel Factor. A toolbox ... SIMoNe’ and ’WGCNA’ approach, from DE genes analysis results and expression data. Additional functions...
  • hmi

  • Referenced in 2 articles [sw19418]
  • package hmi. Runs single level and multilevel imputation models. The user just has to pass ... main function and, optionally, his analysis model. Basically the package then translates this analysis model...
  • MC73

  • Referenced in 7 articles [sw12394]
  • that include matrix reordering, graph partitioning, protein analysis, data mining, machine learning, and web search ... parallel performance of our method with a multilevel scheme, designed specifically for computing the Fiedler...
  • crlmm

  • Referenced in 3 articles [sw24830]
  • different times or by different labs. Analysis algorithms that do not adjust for batch effects ... association. The R package crlmm implements a multilevel model that adjusts for batch effects...
  • HLMdiag

  • Referenced in 2 articles [sw24146]
  • suite of diagnostic tools for hierarchical (multilevel) linear models. The tools include not only leverage ... also convenience functions and graphics for residual analysis. Models can be fit using either lmer...
  • PinT

  • Referenced in 1 article [sw27819]
  • PinT is a program for Power analysis IN Two-level designs (for determination of standard ... errors and optimal sample sizes in multilevel designs with 2 levels). It was written...
  • ScalaBLAST

  • Referenced in 7 articles [sw08812]
  • BLAST for High-Performance Data-Intensive Bioinformatics Analysis. Genes in an organism’s DNA (genome ... distributing the target database over available memory, multilevel parallelism to exploit concurrency, parallel...
  • FEMGPL

  • Referenced in 1 article [sw00273]
  • magnetic or electric field computation, heat transfer analysis and others on personal computers. Besides ... processing routines. In the processor program FEMGPL, multilevel techniques basing on the finite element method...
  • countimp

  • Referenced in 1 article [sw31551]
  • data types like count data require special analysis and imputation techniques. Yet, currently available multiple ... Negative Binomial model, and imputation of multilevel count data based on a generalized linear mixed...
  • PMORSy

  • Referenced in 1 article [sw20559]
  • minimization problem is solved by means of multilevel nested dissection algorithm with modifications for vertex ... Matrix Collection and matrices from finite-element analysis of three-dimensional strength problems show that...
  • AMD

  • Referenced in 60 articles [sw00039]
  • Algorithm 837: AMD is a set of routines...
  • ARMS

  • Referenced in 65 articles [sw00048]
  • ARMS: an algebraic recursive multilevel solver for general...
  • ATLAS

  • Referenced in 199 articles [sw00056]
  • This paper describes the Automatically Tuned Linear Algebra...
  • BoomerAMG

  • Referenced in 196 articles [sw00086]
  • BoomerAMG: A parallel algebraic multigrid solver and preconditioner...
  • CGAL

  • Referenced in 394 articles [sw00118]
  • The goal of the CGAL Open Source Project...
  • COLAMD

  • Referenced in 32 articles [sw00145]
  • Two codes are discussed, COLAMD and SYMAMD, that...
  • Diffpack

  • Referenced in 115 articles [sw00203]
  • As modern programming methodologies migrate from computer science...
  • EIGIFP

  • Referenced in 46 articles [sw00235]
  • eigifp is a MATLAB program for computing a...
  • FEMSTER

  • Referenced in 21 articles [sw00275]
  • FEMSTER is a modular finite element class library...