
stringgaussnet
 Referenced in 0 articles
[sw15372]
 Gaussian Network Construction from Transcriptomic Analysis Results Integrating a Multilevel Factor. A toolbox ... SIMoNe’ and ’WGCNA’ approach, from DE genes analysis results and expression data. Additional functions...

hmi
 Referenced in 2 articles
[sw19418]
 package hmi. Runs single level and multilevel imputation models. The user just has to pass ... main function and, optionally, his analysis model. Basically the package then translates this analysis model...

MC73
 Referenced in 7 articles
[sw12394]
 that include matrix reordering, graph partitioning, protein analysis, data mining, machine learning, and web search ... parallel performance of our method with a multilevel scheme, designed specifically for computing the Fiedler...

crlmm
 Referenced in 3 articles
[sw24830]
 different times or by different labs. Analysis algorithms that do not adjust for batch effects ... association. The R package crlmm implements a multilevel model that adjusts for batch effects...

HLMdiag
 Referenced in 2 articles
[sw24146]
 suite of diagnostic tools for hierarchical (multilevel) linear models. The tools include not only leverage ... also convenience functions and graphics for residual analysis. Models can be fit using either lmer...

PinT
 Referenced in 1 article
[sw27819]
 PinT is a program for Power analysis IN Twolevel designs (for determination of standard ... errors and optimal sample sizes in multilevel designs with 2 levels). It was written...

ScalaBLAST
 Referenced in 7 articles
[sw08812]
 BLAST for HighPerformance DataIntensive Bioinformatics Analysis. Genes in an organism’s DNA (genome ... distributing the target database over available memory, multilevel parallelism to exploit concurrency, parallel...

FEMGPL
 Referenced in 1 article
[sw00273]
 magnetic or electric field computation, heat transfer analysis and others on personal computers. Besides ... processing routines. In the processor program FEMGPL, multilevel techniques basing on the finite element method...

countimp
 Referenced in 1 article
[sw31551]
 data types like count data require special analysis and imputation techniques. Yet, currently available multiple ... Negative Binomial model, and imputation of multilevel count data based on a generalized linear mixed...

PMORSy
 Referenced in 1 article
[sw20559]
 minimization problem is solved by means of multilevel nested dissection algorithm with modifications for vertex ... Matrix Collection and matrices from finiteelement analysis of threedimensional strength problems show that...

AMD
 Referenced in 60 articles
[sw00039]
 Algorithm 837: AMD is a set of routines...

ARMS
 Referenced in 65 articles
[sw00048]
 ARMS: an algebraic recursive multilevel solver for general...

ATLAS
 Referenced in 199 articles
[sw00056]
 This paper describes the Automatically Tuned Linear Algebra...

BoomerAMG
 Referenced in 196 articles
[sw00086]
 BoomerAMG: A parallel algebraic multigrid solver and preconditioner...

CGAL
 Referenced in 394 articles
[sw00118]
 The goal of the CGAL Open Source Project...

COLAMD
 Referenced in 32 articles
[sw00145]
 Two codes are discussed, COLAMD and SYMAMD, that...

Diffpack
 Referenced in 115 articles
[sw00203]
 As modern programming methodologies migrate from computer science...

EIGIFP
 Referenced in 46 articles
[sw00235]
 eigifp is a MATLAB program for computing a...

FEMSTER
 Referenced in 21 articles
[sw00275]
 FEMSTER is a modular finite element class library...