• ice

  • Referenced in 14 articles [sw24700]
  • data from an observational study in ovarian cancer are used to illustrate the most important...
  • curatedOvarianData

  • Referenced in 6 articles [sw17291]
  • curatedOvarianData: clinically annotated data for the ovarian cancer transcriptome. This article introduces a manually curated ... expression meta-analysis of patients with ovarian cancer and software for reproducible preparation of similar ... clinically oriented investigation of the ovarian cancer transcriptome. The package and pipeline for producing...
  • BayesMendel

  • Referenced in 7 articles [sw11022]
  • major cancer syndromes: the breast-ovarian cancer syndrome and the hereditary non-polyposis colorectal cancer...
  • BOADICEA

  • Referenced in 6 articles [sw35768]
  • calculate the risks of breast and ovarian cancer in women based on their family history...
  • SNVMix

  • Referenced in 4 articles [sw29569]
  • transcriptome single nucleotide variant (SNV) discovery in cancer. NGS produces millions of short sequence reads ... quantitatively evaluated these approaches on 16 ovarian cancer RNASeq datasets with matched genotyping arrays...
  • MSFA

  • Referenced in 3 articles [sw32123]
  • gene expression data in ovarian cancer. In both, we clarify the benefits of a joint...
  • deFuse

  • Referenced in 1 article [sw38447]
  • ovarian tumor samples, one ovarian cancer cell line, and three sarcoma samples. We report herein ... first gene fusions discovered in ovarian cancer. We conclude that gene fusions are not infrequent ... events in ovarian cancer and that these events have the potential to substantially alter ... comprehensively characterize the mutational profiles of ovarian cancer transcriptomes...
  • LncmiRSRN

  • Referenced in 1 article [sw34139]
  • four human cancers (glioblastoma multiforme, lung cancer, ovarian cancer and prostate cancer). Based...
  • INSPIRE

  • Referenced in 0 articles [sw18157]
  • driver for tumor-associated stroma in ovarian cancer, Safiye Celik, Benjamin A. Logsdon, Stephanie Battle...
  • Mirsynergy

  • Referenced in 1 article [sw34555]
  • deciphering aberrant transcriptional regulatory network in cancer but is computationally challenging. Existing methods are stochastic ... interactions. Using expression data for ovarian, breast and thyroid cancer from The Cancer Genome Atlas...
  • Matlab

  • Referenced in 13544 articles [sw00558]
  • MATLAB® is a high-level language and interactive...
  • R

  • Referenced in 9969 articles [sw00771]
  • R is a language and environment for statistical...
  • LIBSVM

  • Referenced in 1185 articles [sw04879]
  • LIBSVM is a library for Support Vector Machines...
  • XPPAUT

  • Referenced in 453 articles [sw05543]
  • XPPAUT is software for the analysis and simulation...
  • rda

  • Referenced in 86 articles [sw06091]
  • rda: Shrunken Centroids Regularized Discriminant Analysis , Shrunken Centroids...
  • rpart

  • Referenced in 153 articles [sw07115]
  • R package rpart: Recursive Partitioning. Recursive partitioning and...
  • GQTPAR

  • Referenced in 325 articles [sw07451]
  • Computing a trust region step We propose an...
  • fminsearch

  • Referenced in 271 articles [sw07467]
  • Convergence properties of the Nelder--Mead simplex method...