• COSA

  • Referenced in 47 articles [sw22936]
  • partially (or completely) overlap with those of other clusters. Enhancements for increasing sensitivity for detecting...
  • MixSim

  • Referenced in 34 articles [sw07914]
  • Clustering Algorithms. MixSim allows simulating mixtures of Gaussian distributions with different levels of overlap between ... mixture components. Pairwise overlap, defined as a sum of two misclassification probabilities, measures the degree ... readily employed to control the clustering complexity of datasets simulated from mixtures. These datasets ... used for systematic performance investigation of clustering and finite mixture modeling algorithms. Among other capabilities...
  • CFinder

  • Referenced in 25 articles [sw12379]
  • CFinder: locating cliques and overlapping modules in biological networks. Summary: Most cellular tasks are performed ... nodes, also called communities or clusters. These modules often overlap with each other and form...
  • GAPS

  • Referenced in 14 articles [sw02613]
  • type of clusters, irrespective of their geometrical shape and overlapping nature, as long as they ... GAPS is compared with existing symmetry-based clustering technique SBKM, its modified version...
  • FINDCLUS

  • Referenced in 3 articles [sw20020]
  • CLUStering (ADCLUS) is a tool for overlapping clustering of two-way proximity matrices (objects objects...
  • Soft-LOST

  • Referenced in 7 articles [sw14921]
  • mixture of oriented lines. Robust clustering of data into overlapping linear subspaces is a common...
  • MapSets

  • Referenced in 4 articles [sw13776]
  • produce readable visualizations. In such fixed-clustering and fixed-embedding settings, some methods produce fragmented ... regions that may contain overlaps even if the input clusters are disjoint. par Both fragmented...
  • ADPROCLUS

  • Referenced in 4 articles [sw21692]
  • objects are grouped into clusters that are allowed to overlap (i.e., an object may belong...
  • OrthoMCL

  • Referenced in 15 articles [sw29602]
  • cluster orthologs from multiple species. OrthoMCL clusters are coherent with groups identified ... improved recognition of “recent” paralogs permits overlapping EGO groups representing the same gene ... phylogenetic patterns (http://www.cbil.upenn.edu/gene-family). Analysis of clusters incorporating P. falciparum genes identifies numerous enzymes...
  • CluSim

  • Referenced in 1 article [sw29106]
  • clustering, and tracking the temporal evolution of clusters, among many other tasks. Here we provide ... package for the comparison of partitions, overlapping clusterings, and hierarchical clusterings (dendrograms) with more than...
  • Linkcomm

  • Referenced in 1 article [sw06357]
  • tools for generating, visualizing, and analysing Overlapping Cluster Generator (OCG) communities...
  • ROOTCLUS

  • Referenced in 1 article [sw32800]
  • ROOTCLUS: searching for ”ROOT clusters”’ in three-way proximity data. In the context of three ... described in terms of non-overlapping clusters (ROOT CLUSters) common across all subjects...
  • Mirsynergy

  • Referenced in 1 article [sw34555]
  • propose Mirsynergy, an efficient deterministic overlapping clustering algorithm adapted from a recently developed framework. Mirsynergy...
  • PalmPrints

  • Referenced in 2 articles [sw01755]
  • average clustering of 4 clusters, with minimal overlap between them...
  • IPSep-CoLa

  • Referenced in 9 articles [sw09789]
  • overlapping node labels; and layout of graphs with grouped nodes (called clusters). In the stress...
  • GeneClust

  • Referenced in 1 article [sw08358]
  • patterns (for example, where there are overlapping gene clusters). This chapter describes gene shaving (Hastie...
  • ECCLAT

  • Referenced in 2 articles [sw02548]
  • approximate clustering and discover meaningful clusters with slight overlapping. The approach is illustrated...
  • RuleMerger

  • Referenced in 3 articles [sw22849]
  • clone detection} for identifying overlapping rule portions and {it clustering} for selecting groups of rules...
  • ppclust

  • Referenced in 1 article [sw32044]
  • data set into non-overlapping subsets or clusters by using the prototype-based probabilistic...
  • DPClusOST

  • Referenced in 1 article [sw40254]
  • this paper we implement a generalized graph clustering algorithm DPClusO with easy operating procedure ... version of DPClus algorithm where overlapping property of clusters is taken into consideration along with...