• PseKNC

  • Referenced in 31 articles [sw22436]
  • range sequence order information, via the physicochemical properties of its constituent oligonucleotides. Therefore, the PseKNC ... need by selecting various parameters and physicochemical properties. Furthermore, for the convenience of the vast...
  • iPPI-Esml

  • Referenced in 26 articles [sw22413]
  • interactions of proteins by incorporating their physicochemical properties and wavelet transforms into PseAAC. A cell ... pseudo amino acid composition): (1) the physicochemical properties derived from the constituent amino acids...
  • iNuc-PhysChem

  • Referenced in 24 articles [sw22453]
  • based predictor for identifying nucleosomes via physicochemical properties. Nucleosome positioning has important roles ... comparison among the profiles of twelve DNA physicochemical features between the nucleosomal and linker sequences ... nucleosomal sequences by incorporating these physicochemical properties into a 1788-D (dimensional) feature vector, which...
  • iDNA6mA-PseKNC

  • Referenced in 21 articles [sw27663]
  • methyladenosine sites by incorporating nucleotide physicochemical properties into PseKNC. N6-methyladenine (6mA) is one kind ... that is established by incorporating nucleotide physicochemical properties into Pseudo K-tuple Nucleotide Composition (PseKNC...
  • propy

  • Referenced in 27 articles [sw22402]
  • distribution of various structural and physicochemical properties and two types of pseudo amino acid composition...
  • 2L-piRNA

  • Referenced in 25 articles [sw27667]
  • problems together. Here, by incorporating the physicochemical properties of nucleotides into the pseudo K-tuple...
  • iAMP-2L

  • Referenced in 23 articles [sw22416]
  • PseAAC were featured by incorporating five physicochemical properties. The novel classifier is called iAMP...
  • AAindex

  • Referenced in 47 articles [sw26861]
  • numerical indices representing various physicochemical and biochemical properties of amino acids and pairs of amino...
  • repDNA

  • Referenced in 12 articles [sw16473]
  • sequences by incorporating user-defined physicochemical properties and sequence-order effects. In order to develop ... widely used features reflecting the physicochemical properties and sequence-order effects of DNAs and nucleotides ... sequence in terms of their specific physicochemical properties; the third group calculates six pseudo nucleotide ... considerable sequence-order information via the physicochemical properties of its constituent oligonucleotides. In addition, these...
  • 2D-MH

  • Referenced in 21 articles [sw19727]
  • protein sequences based on the physicochemical properties of their constituent amino acids. Introduction of graphic...
  • iOri-Human

  • Referenced in 13 articles [sw23955]
  • origin of replication by incorporating dinucleotide physicochemical properties into pseudo nucleotide composition. The initiation ... pseudo amino acid composition) that 96 physicochemical properties for the 16 possible constituent dinucleotides have...
  • PseAAC-General

  • Referenced in 16 articles [sw22430]
  • desired modes. In every mode, 544 physicochemical properties of the amino acids are available...
  • iTIS-PseTNC

  • Referenced in 15 articles [sw22449]
  • PseTNC,” was developed by incorporating the physicochemical properties into the pseudo trinucleotide composition, quite similar...
  • PROFEAT

  • Referenced in 14 articles [sw16924]
  • distribution of various structural and physicochemical properties. In addition, it can also compute previous autocorrelations...
  • PseKNC-General

  • Referenced in 8 articles [sw16606]
  • widely used nucleotide structural and physicochemical properties of both DNA and RNA sequences. PseKNC-General ... PseKNC. In every mode, >100 physicochemical properties are available for choosing. Moreover, it is flexible...
  • pSLIP

  • Referenced in 6 articles [sw35549]
  • protein subcellular localization prediction using multiple physicochemical properties. Results: In this paper, we propose ... Machines (SVMs) in conjunction with multiple physicochemical properties of amino acids to predict protein subcellular ... Conclusion: This study presents a physicochemical property based protein localization prediction algorithm. Unlike other algorithms...
  • SubMito-PSPCP

  • Referenced in 6 articles [sw22432]
  • submitochondrial locations by hybridizing positional specific physicochemical properties with pseudoamino acid compositions. Knowing the submitochondrial ... introducing a new concept: positional specific physicochemical properties. With the framework of general form pseudoamino...
  • PSNO

  • Referenced in 6 articles [sw27678]
  • predicted secondary structure and the physicochemical properties. Secondly, rather than simply combining the features, which...
  • repRNA

  • Referenced in 5 articles [sw16852]
  • features from 22 built-in physicochemical properties and even those defined by users...
  • OOgenesis_Pred

  • Referenced in 5 articles [sw25083]
  • proteins. By means of informative protein physicochemical properties and in addition parameter optimization scheme...