• NR-2L

  • Referenced in 9 articles [sw26879]
  • amino acid composition formed by incorporating various physicochemical and statistical features derived from the protein...
  • PseDNA-Pro

  • Referenced in 6 articles [sw22424]
  • Identification by Combining Chou’s PseAAC and Physicochemical Distance Transformation. Identification of DNA-binding proteins ... acid composition (PseAAC) proposed by Chou and physicochemical distance transformation. These features not only consider...
  • SubMito-PSPCP

  • Referenced in 6 articles [sw22432]
  • protein submitochondrial locations by hybridizing positional specific physicochemical properties with pseudoamino acid compositions. Knowing ... introducing a new concept: positional specific physicochemical properties. With the framework of general form pseudoamino...
  • SCPRED

  • Referenced in 6 articles [sw26876]
  • that considers over 2300 index-, composition- and physicochemical properties-based features along with features based...
  • PSNO

  • Referenced in 6 articles [sw27678]
  • profile, the predicted secondary structure and the physicochemical properties. Secondly, rather than simply combining...
  • repRNA

  • Referenced in 5 articles [sw16852]
  • select the features from 22 built-in physicochemical properties and even those defined by users...
  • RSARF

  • Referenced in 5 articles [sw22442]
  • still a challenging problem. The complete physicochemical understanding of protein folding is essential...
  • OOgenesis_Pred

  • Referenced in 5 articles [sw25083]
  • oogenesis proteins. By means of informative protein physicochemical properties and in addition parameter optimization scheme...
  • PLMLA

  • Referenced in 4 articles [sw36907]
  • acid composition to extract sequence information and physicochemical properties around lysine sites. The prediction accuracy...
  • NRPSpredictor2

  • Referenced in 2 articles [sw25365]
  • four hierarchical levels, ranging from gross physicochemical properties of an A-domain’s substrates down ... fungal A-domains, which predicts gross physicochemical properties with an F-measure...
  • CRASP

  • Referenced in 2 articles [sw40576]
  • correlation coefficient between the values of a physicochemical parameter at a pair of positions ... evolutionary invariance or variability in integral protein physicochemical characteristics such as the net charge...
  • MOLGEN-QSPR

  • Referenced in 3 articles [sw00587]
  • continuous target variable representing the physicochemical properties under consideration. The QSPR search consists of three...
  • VaxiJen

  • Referenced in 3 articles [sw26855]
  • allow antigen classification solely based on the physicochemical properties of proteins without recourse to sequence...
  • SCOWLP

  • Referenced in 3 articles [sw35413]
  • interacting residues and interface solvent by atomic physicochemical properties. SCOWLP is automatically updated with every...
  • moleculaRnetworks

  • Referenced in 2 articles [sw27065]
  • preprocessor, which distills simulation trajectories into physicochemical data arrays, and an interactive analysis script that...
  • HELIQUEST

  • Referenced in 2 articles [sw35348]
  • specific α-helical properties . HELIQUEST calculates the physicochemical properties and amino acid composition...
  • AMMOS_ProtLig

  • Referenced in 1 article [sw06613]
  • five protein-ligand complexes with different physicochemical properties and topology. Data Extraction Module reduces...
  • PECM

  • Referenced in 1 article [sw22408]
  • including evolutionary information, predicted secondary structure, and physicochemical properties. Rather than simply combining the features...
  • Simcyp

  • Referenced in 1 article [sw23162]
  • vitro enzyme and cellular systems and relevant physicochemical attributes of compound and dosage form with...
  • ChemoPy

  • Referenced in 1 article [sw23811]
  • calculating the commonly used structural and physicochemical features. It computes 16 drug feature groups composed...