• FISHtrees

  • Referenced in 1 article [sw29659]
  • help explain the difficulty in finding biomarkers that predict which DCIS cases are at most...
  • emba

  • Referenced in 1 article [sw35159]
  • ensemble of boolean models for biomarker discovery in cancer cell networks. The package allows ... results of the DrugLogics software pipeline which predicts synergistic drug combinations in cancer cell lines ... positive predictions/Matthews correlation coefficient score) or synergy prediction based on a given set of gold ... that they make the models predict specific synergies (synergy biomarkers) or have better performance...
  • MetaboAnalyst

  • Referenced in 3 articles [sw28993]
  • conditions (biomarker discovery); 2) to use the metabolomic data to predict the conditions under study...
  • ToxDB

  • Referenced in 0 articles [sw29374]
  • generated in order to identify biomarkers that are predictive for toxicity or to classify compounds...
  • ptr

  • Referenced in 1 article [sw39384]
  • present the command ptr, which both predicts a personalized treatment recommendation algorithm and evaluates ... command allows for multiple (continuous or categorical) biomarkers and a binary or continuous outcome. Confidence...
  • SubgrpID

  • Referenced in 1 article [sw40283]
  • algorithms for developing threshold-based multivariate (prognostic/predictive) biomarker signatures via bootstrapping and aggregating of thresholds ... signatures are returned with interaction plots for predictive signatures. Cross-validation performance evaluation and testing...
  • DeepLGP

  • Referenced in 0 articles [sw37448]
  • encoding proteins, they have been verified as biomarkers in the occurrence and development of complex ... computational methods have been designed for predicting the novel target genes of lncRNA. Results...
  • GAUSS

  • Referenced in 119 articles [sw00322]
  • The GAUSS Mathematical and Statistical System is a...
  • Matlab

  • Referenced in 13544 articles [sw00558]
  • MATLAB® is a high-level language and interactive...
  • R

  • Referenced in 9969 articles [sw00771]
  • R is a language and environment for statistical...
  • STATISTICA

  • Referenced in 37 articles [sw00913]
  • Since 1984, StatSoft has been developing the STATISTICA...
  • SVMlight

  • Referenced in 264 articles [sw04076]
  • Description (homepage): SVMlight is an implementation of Vapnik...
  • Bioconductor

  • Referenced in 319 articles [sw04205]
  • Bioconductor provides tools for the analysis and comprehension...
  • SPSS

  • Referenced in 673 articles [sw04269]
  • SPSS is a computer program used for survey...
  • CODA

  • Referenced in 355 articles [sw04290]
  • R package coda: Output analysis and diagnostics for...
  • quantreg

  • Referenced in 161 articles [sw04356]
  • R package quantreg: Quantile Regression. Estimation and inference...
  • car

  • Referenced in 74 articles [sw04358]
  • R package car: Companion to Applied Regression , This...
  • survival

  • Referenced in 199 articles [sw04364]
  • R package survival: Survival analysis, including penalised likelihood...
  • pls

  • Referenced in 34 articles [sw04365]
  • R package pls: Partial Least Squares and Principal...
  • MASS (R)

  • Referenced in 331 articles [sw04479]
  • R package MASS: Support Functions and Datasets for...