• PySB

  • Referenced in 10 articles [sw13437]
  • that encode standard biochemical actions. These features promote model transparency, reuse and accuracy. PySB also ... SciPy and SymPy enabling model simulation and analysis...
  • PETAPS

  • Referenced in 2 articles [sw02170]
  • development of a prototype decision support system -- promotion evaluation, tracking and planning system -- built ... provide an analysis of the marketing environment and the role of promotions which leads...
  • MetaPL

  • Referenced in 1 article [sw01625]
  • system for parallel program description and performance analysis. This paper introduces MetaPL, a notation system ... program description promotes the use of performance analysis during software development. After a description...
  • CST MICROWAVE STUDIO

  • Referenced in 11 articles [sw15733]
  • enables the fast and accurate analysis of high frequency (HF) devices such as antennas, filters ... behavior of your high frequency designs. CST promotes Complete Technology for 3D EM. Users...
  • ReachLab

  • Referenced in 3 articles [sw10313]
  • same framework using Hybrid System Analysis and Design Language (HADL), which is a meta-model ... algorithms to be constructed hierarchically and promotes their reuse in constructing more complex algorithms. Moreover ... concerns of design and implementation of analysis algorithms are separated. On one hand, the models...
  • GOLD

  • Referenced in 6 articles [sw23027]
  • single-cell genome, metagenome, metatranscriptome) and complex Analysis Projects (such as genome from metagenome ... Microbial Genomes (IMG) system and supports and promotes the Genomic Standards Consortium (GSC) Minimum Information...
  • iEnhancer-2L

  • Referenced in 22 articles [sw18831]
  • hence play a critical role in promoting gene transcription in eukaryotes. With the avalanche ... become a useful tool for genome analysis. Availability and implementation: For the convenience of most...
  • MULTIFAN-CL

  • Referenced in 2 articles [sw30316]
  • frequency analysis that was an alternative to several ad hoc methods being promoted...
  • EAST

  • Referenced in 1 article [sw36900]
  • analysis of Hi-C data, e.g., to identify enhancer-promoter associations. Here we present East...
  • Repitools

  • Referenced in 1 article [sw20385]
  • Bioconductor package Repitools. Tools for the analysis of enrichment-based epigenomic data. Features include summarization ... visualization of epigenomic data across promoters according to gene expression context, finding regions of differential...
  • Lightkurve

  • Referenced in 2 articles [sw30654]
  • friendly package for Kepler & TESS time series analysis in Python. Lightkurve offers a user-friendly ... exoplanet missions. Lightkurve aims to lower barriers, promote best practices, and reduce costs by providing...
  • OSSmole

  • Referenced in 1 article [sw12993]
  • analysis efforts of many disparate research groups. A collaborative data repository reduces duplication and promote...
  • MGtoolkit

  • Referenced in 1 article [sw20623]
  • MGtoolkit can help verify such policies and promotes learning and experimentation with metagraphs. The package ... textual output for visualising metagraphs and their analysis results...
  • REDLIB

  • Referenced in 5 articles [sw21175]
  • Formal Verification of Embedded Systems. To promote the technology of dense-time system model-checking ... representation normalizations, greatest fixpoint calculation, parametric safety analysis of linear hybrid systems, speed-up techniques...
  • COBRApy

  • Referenced in 3 articles [sw16711]
  • leading software package for genome-scale analysis of metabolism; however, it was not designed ... openCOBRA Project is a community effort to promote constraints-based research through the distribution...
  • TFExplorer

  • Referenced in 1 article [sw35546]
  • TFExplorer: integrated analysis database for predicted transcription regulatory elements. Summary: TFExplorer is a web-based ... binding sites of transcription factors in the promoter regions, along with their phylogenetic footprinting information...
  • Paleomagnetism.org

  • Referenced in 1 article [sw26212]
  • statistical evaluation of Paleomagnetic data. The website promotes the ability to share Paleomagnetic data between ... portals contain multiple modules that aid the analysis of your data...
  • ChIPmix

  • Referenced in 4 articles [sw35320]
  • methods already proposed are based on the analysis of the log ratio (Ip/Input). Nevertheless ... organisms and hybridized either on tiling or promoter arrays. This validation shows that ChIPmix...
  • Termite

  • Referenced in 0 articles [sw21633]
  • analysis tool for assessing topic model quality. Termite uses a tabular layout to promote comparison...
  • KiWi

  • Referenced in 2 articles [sw35295]
  • clustering has gained increasing popularity in the analysis of gene expression data. Among subspace cluster ... experiments with common clinical annotations, differentiates real promoter sequences from negative control sequences, and shows...