• Cell-PLoc

  • Referenced in 90 articles [sw09126]
  • servers for predicting subcellular localization of proteins in various organisms. Information on subcellular localization ... positive bacterial, Gram-negative bacterial and viral proteins, respectively. Using these Web servers ... data sets that covered up to 22 subcellular location sites and in which none...
  • Euk-mPLoc

  • Referenced in 42 articles [sw26860]
  • critical challenges in predicting protein subcellular localization is how to deal with the case ... proteins in budding yeast only. For most existing predictors, the multiple-site proteins are either ... existing methods for predicting eukaryotic protein subcellular localization are limited in the case of single ... eukaryotic protein entries in the Swiss-Prot database that do not have subcellular location annotations...
  • Plant-mPLoc

  • Referenced in 27 articles [sw22435]
  • augment the power for predicting plant protein subcellular localization. One of the fundamental goals ... existing methods in predicting plant protein subcellular localization can only cover three or four location ... existing methods for predicting plant protein subcellular localization, the new predictor is much more powerful ... existing predictors specialized for identifying plant protein subcellular localization. As a user-friendly web-server...
  • iLoc-Euk

  • Referenced in 37 articles [sw22434]
  • subcellular localization of singleplex and multiplex eukaryotic proteins. Predicting protein subcellular localization is an important ... move between, two or more different subcellular location sites. Most of the existing protein subcellular...
  • pLoc-mPlant

  • Referenced in 27 articles [sw25191]
  • pLoc-mPlant: predict subcellular localization of multi-location plant proteins by incorporating the optimal ... biochemistry is to identify the functions of proteins in the context of compartments that organize ... fast and accurate identification of the subcellular locations of uncharacterized proteins. The current study ... method for predicting plant protein subcellular localization. To maximize the convenience of most experimental scientists...
  • Hum-PLoc

  • Referenced in 24 articles [sw26863]
  • novel ensemble classifier for predicting human protein subcellular localization. Predicting subcellular localization of human proteins ... have significant homology to proteins of known subcellular locations and when more locations need...
  • pLoc-mGneg

  • Referenced in 23 articles [sw25190]
  • pLoc-mGneg: Predict subcellular localization of Gram-negative bacterial proteins by deep gene ontology learning ... general PseAAC. Information of the proteinssubcellular localization is crucially important for revealing their biological ... unit of life. With the avalanche of protein sequences generated in the postgenomic ... mGneg” for predicting the subcellular localization of Gram-negative bacterial proteins with both single...
  • iLoc-Virus

  • Referenced in 31 articles [sw22417]
  • learning classifier for identifying the subcellular localization of virus proteins with both single and multiple ... computational methods were developed for predicting the subcellular locations of proteins according to their sequence ... viruses. Actually, knowledge of the subcellular localization of viral proteins in a host cell...
  • iLoc-Animal

  • Referenced in 20 articles [sw22427]
  • classifier for predicting subcellular localization of animal proteins. Predicting protein subcellular localization is a challenging ... move between, two or more different subcellular location sites. Most of the existing methods...
  • Hum-mPLoc

  • Referenced in 26 articles [sw26862]
  • existing methods for predicting human protein subcellular localization are limited in the case of single ... human protein entries in the Swiss-Prot database that do not have subcellular location annotations...
  • pLoc-mVirus

  • Referenced in 23 articles [sw24439]
  • pLoc-mVirus: Predict subcellular localization of multi-location virus proteins via incorporating the optimal ... information into general PseAAC. Knowledge of subcellular locations of proteins is crucially important ... method in predicting virus protein subcellular localization. To maximize the convenience of most experimental scientists...
  • pLoc-mHum

  • Referenced in 20 articles [sw27661]
  • pLoc-mHum: predict subcellular localization of multi-location human proteins via general PseAAC to winnow ... functions of proteins in a cell, the knowledge of their subcellular localization is indispensable ... method in predicting the human protein subcellular localization. Availability and implementation: To maximize the convenience...
  • iLoc-Plant

  • Referenced in 18 articles [sw22419]
  • subcellular localization of plant proteins with both single and multiple sites. Predicting protein subcellular localization ... move between, two or more different subcellular location sites. Most of the existing methods...
  • ESLpred

  • Referenced in 20 articles [sw22403]
  • ESLpred: SVM-based method for subcellular localization of eukaryotic proteins using dipeptide composition ... BLAST. Automated prediction of subcellular localization of proteins is an important step in the functional ... annotation of genomes. The existing subcellular localization prediction methods are based on either amino acid ... proteins. In this paper, support vector machine (SVM) has been used to predict the subcellular...
  • pLoc-mEuk

  • Referenced in 30 articles [sw24440]
  • pLoc-mEuk: Predict subcellular localization of multi-label eukaryotic proteins by extracting ... been made in predicting the subcellular localization of eukaryotic proteins, but most of the existing...
  • Psortb

  • Referenced in 18 articles [sw11344]
  • Psortb v.2.0: expanded prediction of bacterial protein subcellular localization and insights gained from comparative proteome ... PSORTb v.1.1 is the most precise bacterial localization prediction tool available. However, the program ... comparative analysis of localization. Results: An expanded database of proteins of known localization...
  • iLoc-Hum

  • Referenced in 36 articles [sw22433]
  • multiple subcellular locations. This kind of multiplex proteins should not be ignored because they ... developed for identifying the subcellular localization of human proteins with both single and multiple location...
  • pLoc-mAnimal

  • Referenced in 27 articles [sw24438]
  • pLoc-mAnimal: predict subcellular localization of animal proteins with both single and multiple sites. Motivation ... protein molecules located at their different organelles or locations. Facing explosive growth of protein sequences ... effective method to annotate their subcellular localization. However, this is by no means an easy ... task. Particularly, mounting evidences have indicated proteins have multi-label feature meaning that they...
  • MultiLoc

  • Referenced in 11 articles [sw35402]
  • MultiLoc: prediction of protein subcellular localization using N-terminal targeting sequences, sequence motifs and amino ... prediction of a protein’s subcellular localization. Numerous prediction techniques have been developed, typically focusing ... predicting subcellular localization, which integrates N-terminal targeting sequences, amino acid composition and protein sequence ... comparable methods predicting all major eukaryotic subcellular localizations, and shows better or comparable results...
  • pLoc_bal-mGpos

  • Referenced in 11 articles [sw27673]
  • pLoc_bal-mGpos: Predict subcellular localization of Gram-positive bacterial proteins by quasi-balancing ... training dataset and PseAAC. Knowledge of protein subcellular localization is vitally important for both basic ... developed for identifying the subcellular localization of Gram-positive bacterial proteins. Its performance is overwhelmingly ... predictor in identifying the subcellular localization of Gram-positive bacterial proteins. To maximize the convenience...