• MesoRD

  • Referenced in 30 articles [sw18202]
  • Markov process corresponding to the reaction-diffusion master equation. Availability: MesoRD is free software, written...
  • URDME

  • Referenced in 25 articles [sw10400]
  • geometries, and relies on the Reaction-Diffusion Master Equation formalism to model the processes under...
  • TFPDE

  • Referenced in 6 articles [sw12622]
  • moment statistics of stochastic partial differential equations with pure jump tempered α-stable (TαS) Lévy ... simulate the moment statistics of stochastic reaction-diffusion equations with additive TαS white noises...
  • MOL1D

  • Referenced in 1 article [sw36300]
  • parabolic equations (including those arising in reaction-diffusion equations), and elliptic boundary-value problems when...
  • PyURDME

  • Referenced in 2 articles [sw16723]
  • based on the mesoscopic reaction-diffusion master equation (RDME) model. PyURDME was originally based...
  • Amp_solving

  • Referenced in 1 article [sw10848]
  • Derivation of the amplitude equation for reaction-diffusion systems via computer-aided multiple-scale expansion ... solving is presented for deriving the amplitude equations in this research. Amp_solving has been...
  • Morpheus

  • Referenced in 0 articles [sw34557]
  • based models with ordinary differential equations and reaction-diffusion systems. It allows rapid development...
  • FIDAP

  • Referenced in 37 articles [sw00006]
  • FIDAP (A Fluid Dynamics Analysis Program). This paper...
  • ALBERT

  • Referenced in 82 articles [sw00025]
  • ALBERT - Software for scientific computations and applications. Adaptive...
  • BoomerAMG

  • Referenced in 168 articles [sw00086]
  • BoomerAMG: A parallel algebraic multigrid solver and preconditioner...
  • CGAL

  • Referenced in 362 articles [sw00118]
  • The goal of the CGAL Open Source Project...
  • Chaste

  • Referenced in 46 articles [sw00122]
  • Chaste: incorporating a novel multi-scale spatial and...
  • CHEMSODE

  • Referenced in 11 articles [sw00124]
  • The ODEs describing a chemical kinetics system can...
  • Diffpack

  • Referenced in 114 articles [sw00203]
  • As modern programming methodologies migrate from computer science...
  • Expokit

  • Referenced in 180 articles [sw00258]
  • Expokit provides a set of routines aimed at...
  • FEMLAB

  • Referenced in 56 articles [sw00274]
  • COMSOL Multiphysics, vormals FEMLAB, ist eine Software zur...
  • Gmsh

  • Referenced in 627 articles [sw00366]
  • Gmsh is a 3D finite element grid generator...
  • HSL

  • Referenced in 274 articles [sw00418]
  • HSL (formerly the Harwell Subroutine Library) is a...
  • IRKC

  • Referenced in 20 articles [sw00452]
  • The Fortran 90 code IRKC is intended for...
  • LAPACK

  • Referenced in 1647 articles [sw00503]
  • LAPACK is written in Fortran 90 and provides...