• sPuReMD

  • Referenced in 6 articles [sw12865]
  • Reactive molecular dynamics: numerical methods and algorithmic techniques. ..In this paper, we present implementation details ... sPuReMD (serial Purdue reactive molecular dynamics program), a unique reactive classical MD code. We describe...
  • PuReMD

  • Referenced in 3 articles [sw18042]
  • PuReMD-GPU: A reactive molecular dynamics simulation package for GPUs. We present an efficient ... community code, PuReMD, for reactive molecular dynamics simulations using the ReaxFF force field. PuReMD...
  • GULP

  • Referenced in 20 articles [sw01459]
  • dynamics, where possible, rather than on molecular dynamics. A variety of force fields ... molecular mechanics for organic systems, the embedded atom model for metals and the reactive REBO...
  • CGAL

  • Referenced in 370 articles [sw00118]
  • The goal of the CGAL Open Source Project...
  • Gmsh

  • Referenced in 635 articles [sw00366]
  • Gmsh is a 3D finite element grid generator...
  • hypre

  • Referenced in 284 articles [sw00426]
  • hypre is a software library for the solution...
  • IMD

  • Referenced in 7 articles [sw00438]
  • IMD is a software package for classical molecular...
  • LAPACK

  • Referenced in 1649 articles [sw00503]
  • LAPACK is written in Fortran 90 and provides...
  • Maple

  • Referenced in 5199 articles [sw00545]
  • The result of over 30 years of cutting...
  • Mathematica

  • Referenced in 6090 articles [sw00554]
  • Almost any workflow involves computing results, and that...
  • Matlab

  • Referenced in 12640 articles [sw00558]
  • MATLAB® is a high-level language and interactive...
  • NITSOL

  • Referenced in 93 articles [sw00623]
  • We introduce a well-developed Newton iterative (truncated...
  • PARAMESH

  • Referenced in 100 articles [sw00677]
  • PARAMESH: A parallel adaptive mesh refinement community toolkit...
  • R

  • Referenced in 8836 articles [sw00771]
  • R is a language and environment for statistical...
  • RKC

  • Referenced in 115 articles [sw00808]
  • RKC: An explicit solver for parabolic PDEs. An...
  • SUNDIALS

  • Referenced in 220 articles [sw00927]
  • SUNDIALS was implemented with the goal of providing...
  • TISEAN

  • Referenced in 162 articles [sw00967]
  • Practical implementation of nonlinear time series methods: The...
  • UMFPACK

  • Referenced in 375 articles [sw00989]
  • An ANSI C code for sparse LU factorization...
  • PRISM

  • Referenced in 423 articles [sw01186]
  • PRISM: Probabilistic symbolic model checker. In this paper...