
TINKER
 Referenced in 10 articles
[sw04095]
 rigid body space, symplectic RESPA multiple time step integration for molecular dynamics, velocity ... Verlet stochastic dynamics, pairwise neighbor lists and splined spherical energy cutoff methods, particle mesh Ewald...

MesoBioNano
 Referenced in 1 article
[sw18198]
 consider the molecular and random walk dynamics. MBN Explorer allows to use a broad variety ... particles in the system into rigid fragments, thereby significantly reducing the number of dynamical degrees...

MarDyn
 Referenced in 4 articles
[sw23454]
 largest molecular simulation with over four trillion particles. It enables the application of pair potentials ... scope for molecular dynamics simulation. With an efficient dynamic load balancing scheme, it delivers high ... even for challenging heterogeneous configurations. Presently, multicenter rigid potential models based on LennardJones sites...

HYDROLIB
 Referenced in 1 article
[sw33792]
 moving particles, and freely moving rigid clusters of particles. A special option is provided ... calculate the velocities of the particles in a Stokesian Dynamics simulation. The particle configuration...

Mirheo
 Referenced in 1 article
[sw41061]
 microscale geometries. The code employs Dissipative Particle Dynamics for the description of the flow coupled ... blood cells and can also handle rigid bodies and complex geometries. The software (MiRheo...

Xper
 Referenced in 1 article
[sw32486]
 /NSCD coupling framework to simulate immersed particle interactions. Immersed granular flows are present widely ... represent well the physics behind their dynamics: the fluid/solid interactions (FSI), the solid/solid interactions ... based on the NonSmooth Contact Dynamics (NSCD) approach developed in the “LMGC90” opensource ... settling solid disks on modifying their dynamics. The DFIBM approach implemented in Xper...

ANSYS
 Referenced in 703 articles
[sw00044]
 ANSYS offers a comprehensive software suite that spans...

BoomerAMG
 Referenced in 195 articles
[sw00086]
 BoomerAMG: A parallel algebraic multigrid solver and preconditioner...

GAP
 Referenced in 3154 articles
[sw00320]
 GAP is a system for computational discrete algebra...

Gmsh
 Referenced in 720 articles
[sw00366]
 Gmsh is a 3D finite element grid generator...

HSL
 Referenced in 279 articles
[sw00418]
 HSL (formerly the Harwell Subroutine Library) is a...

hypre
 Referenced in 306 articles
[sw00426]
 hypre is a software library for the solution...

LAPACK
 Referenced in 1695 articles
[sw00503]
 LAPACK is written in Fortran 90 and provides...

Macaulay2
 Referenced in 1904 articles
[sw00537]
 Macaulay2 is a software system devoted to supporting...

Maple
 Referenced in 5363 articles
[sw00545]
 The result of over 30 years of cutting...

Mathematica
 Referenced in 6337 articles
[sw00554]
 Almost any workflow involves computing results, and that...

Matlab
 Referenced in 13460 articles
[sw00558]
 MATLAB® is a highlevel language and interactive...

PARDISO
 Referenced in 286 articles
[sw00679]
 The package PARDISO is a threadsafe, high...

PLTMG
 Referenced in 215 articles
[sw00717]
 PLTMG 11.0 is a package for solving elliptic...