
ddepn
 Referenced in 1 article
[sw14723]
 Chain Monte Carlo method for sampling network structures with two edge types (activation and inhibition ... that learns signalling networks with the scalefree property. Conclusions: The package ’ddepn’ is freely ... data using two different sampling based network structure search algorithms...

Jimena
 Referenced in 1 article
[sw29354]
 introduce and setup Booleantreebased data structures; (ii) corresponding algorithms greatly expedite the calculation ... sampled efficiently in small up to large scale hormone disease networks (Arabidopsis thaliana development ... greater gains are achieved for large scalefree networks. This speedup also facilitates...

March_eq
 Referenced in 13 articles
[sw00548]
 March_eq: Implementing additional reasoning into an efficient...

Mathematica
 Referenced in 6337 articles
[sw00554]
 Almost any workflow involves computing results, and that...

MiniSat
 Referenced in 565 articles
[sw00577]
 An extensible SATsolver. MiniSat is a minimalistic...

NetworkX
 Referenced in 159 articles
[sw00616]
 NetworkX (NX) is a Python package for the...

Octave
 Referenced in 304 articles
[sw00646]
 GNU Octave is a highlevel language, primarily...

R
 Referenced in 9810 articles
[sw00771]
 R is a language and environment for statistical...

SLEPc
 Referenced in 194 articles
[sw00875]
 SLEPc the Scalable Library for Eigenvalue Problem Computations...

BRITE
 Referenced in 34 articles
[sw03098]
 BRITE: A Flexible Generator of Internet Topologies. Abstract...

Pajek
 Referenced in 154 articles
[sw03707]
 Pajek  analysis and visualization of large networks. Pajek...

PETSc
 Referenced in 1541 articles
[sw04012]
 The Portable, Extensible Toolkit for Scientiﬁc Computation (PETSc...

HyTech
 Referenced in 331 articles
[sw04125]
 HyTech is an automatic tool for the analysis...

SNAP
 Referenced in 166 articles
[sw04184]
 Stanford Network Analysis Platform (SNAP) is a general...

ggplot2
 Referenced in 352 articles
[sw04557]
 R package ggplot2: An implementation of the Grammar...

GAMS
 Referenced in 865 articles
[sw04978]
 The General Algebraic Modeling System (GAMS) is specifically...

ergm
 Referenced in 68 articles
[sw06777]
 R package ergm: Fit, Simulate and Diagnose Exponential...

Excel
 Referenced in 786 articles
[sw06848]
 Microsoft Excel is a powerful spreadsheet application that...