• Taverna

  • Referenced in 46 articles [sw08764]
  • composition and enactment of bioinformatics workflows for the life sciences community. The tool includes ... graphical user interface for the composition of workflows. These workflows are written...
  • Atomate

  • Referenced in 3 articles [sw32763]
  • generate, execute, and analyze computational materials science workflows. We introduce atomate, an open-source Python ... framework for computational materials science simulation, analysis, and design with an emphasis on automation ... FireWorks, and custodian, atomate provides well-tested workflow templates to compute various materials properties such ... enable one to compose complex materials science workflows that use a diverse set of computational...
  • CARTO

  • Referenced in 2 articles [sw24931]
  • Inject Location Intelligence into your data science workflows. Interactively analyze and visualize location data directly...
  • AiiDA

  • Referenced in 6 articles [sw27272]
  • simulations, data, and workflows of modern-day computational science. Able to store the full provenance ... thanks to its flexible plugin interface and workflow engine for the automation of complex sequences...
  • kiwiPy

  • Referenced in 1 article [sw35506]
  • messaging for big-data and computational science workflows. In this work we present kiwiPy...
  • Cognito

  • Referenced in 1 article [sw37875]
  • that is central to the data science workflow. In this paper, we present a novel...
  • BOSS-LDG

  • Referenced in 1 article [sw37799]
  • Wave Observatory (LIGO) Data Grid via Open Science Grid technology. To enable this computational infrastructure ... that can submit heterogeneous LIGO workflows using Open Science Grid facilities. In order to enable ... Open Science Grid, we utilize Shifter to containerize LIGO’s workflow software. This work represents ... first time Open Science Grid, Shifter, and Blue Waters are unified to tackle a scientific...
  • FireWorks

  • Referenced in 5 articles [sw28739]
  • workflow software for running high-throughput calculation workflows at supercomputing centers. FireWorks has been used ... hours worth of computational chemistry and materials science calculations at the National Energy Research Supercomputing ... automated duplicate detection, and v dynamic workflows i.e., modifying the workflow graph during runtime ... enabling modern data-driven and high-throughput science applications, and we discuss our implementation strategy...
  • Petrel

  • Referenced in 7 articles [sw07842]
  • science in an unparalleled productivity environment. This shared earth approach enables companies to standardize workflows...
  • GlideinWMS

  • Referenced in 1 article [sw37796]
  • Adapting LIGO workflows to run in the Open Science Grid. During the first observation ... intense CPU workflows from its dedicated computing sites to opportunistic resources. Open Science Grid enabled...
  • targets

  • Referenced in 3 articles [sw38219]
  • Like Declarative Workflows. As a pipeline toolkit for Statistics and data science ... function-oriented programming and ’Make’-like declarative workflows. It analyzes the dependency relationships among...
  • InteractiVenn

  • Referenced in 1 article [sw30167]
  • data analysis workflows, in particular workflows in biological sciences. Venn diagrams are frequently employed...
  • Avizo

  • Referenced in 5 articles [sw18539]
  • processed, in life sciences, materials science, natural sciences or industrial inspection applications, Amira & Avizo offer ... exploration and analysis features within an intuitive workflow and easy-to-use graphical user interface...
  • Pace3D

  • Referenced in 1 article [sw42001]
  • microstructure development. The data science methods can be combined as workflows and are made available...
  • OSG-KINC

  • Referenced in 1 article [sw29629]
  • expression network construction using the open science grid. Gene Co-expression Network (GCN) analysis ... information. OSG-KINC is a Pegasus workflow that enables highly parallel execution of KINC - Knowledge ... Open Science Grid (OSG). A yeast GCN was constructed using the OSG-KINC workflow, providing...
  • Nutils

  • Referenced in 6 articles [sw28029]
  • time leaving full flexibility to build novel workflows or interact with third party tools. With ... forefront of numerical discretization science. Efficient under-the-hood vectorization and built-in parallellisation provide...
  • SimPrily

  • Referenced in 1 article [sw32668]
  • high-throughput workflows that leverage free computing resources through the Open Science Grid and CyVerse...
  • FIAKER

  • Referenced in 1 article [sw42087]
  • science. The methods are integrated in a tool (FIAKER) that supports the entire workflow...
  • Orange4WS

  • Referenced in 4 articles [sw27294]
  • mining. Novel data-mining tasks in e-science involve mining of distributed, highly heterogeneous data ... enabling automated composition of complex knowledge discovery workflows for a given data mining task. This...
  • ProMiner

  • Referenced in 5 articles [sw22565]
  • entity recognition in the field of life sciences: ProMiner can handle voluminous dictionaries, complex thesauri ... recognized; high speed tagging and parallel workflow for multiple dictionaries; incorporation of regular expressions...